Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MY9_RS07880 Genome accession   NC_017743
Coordinates   1540264..1540848 (+) Length   194 a.a.
NCBI ID   WP_014663802.1    Uniprot ID   -
Organism   Bacillus sp. JS     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1535264..1545848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MY9_RS07850 (MY9_1554) dapD 1535458..1536168 (+) 711 WP_014663797.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MY9_RS07855 (MY9_1555) - 1536238..1537362 (+) 1125 WP_014663798.1 N-acetyldiaminopimelate deacetylase -
  MY9_RS07860 (MY9_1556) - 1537424..1537669 (+) 246 WP_003232382.1 YkuS family protein -
  MY9_RS07865 (MY9_1557) mscT 1537705..1538508 (-) 804 WP_014663799.1 small-conductance mechanosensitive channel protein MscT -
  MY9_RS07870 (MY9_1558) ahpA 1538746..1539288 (+) 543 WP_014663800.1 biofilm-specific peroxidase AhpA -
  MY9_RS07875 (MY9_1559) ykuV 1539357..1539815 (+) 459 WP_014663801.1 thiol-disulfide oxidoreductase YkuV -
  MY9_RS07880 (MY9_1560) rok 1540264..1540848 (+) 585 WP_014663802.1 transcriptional regulator Rok Regulator
  MY9_RS07885 (MY9_1561) cse15 1540888..1541850 (-) 963 WP_014663803.1 spore protein Cse15 -
  MY9_RS07890 (MY9_1562) - 1541986..1542585 (+) 600 WP_014663804.1 molybdenum cofactor guanylyltransferase -
  MY9_RS07895 (MY9_1563) - 1542636..1543655 (+) 1020 WP_014663805.1 molybdopterin-synthase adenylyltransferase MoeB -
  MY9_RS07900 (MY9_1564) glp 1543673..1544965 (+) 1293 WP_014663806.1 gephyrin-like molybdotransferase Glp -
  MY9_RS07905 (MY9_1565) mobB 1544926..1545447 (+) 522 WP_014663807.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22141.15 Da        Isoelectric Point: 9.7036

>NTDB_id=50601 MY9_RS07880 WP_014663802.1 1540264..1540848(+) (rok) [Bacillus sp. JS]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIETAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=50601 MY9_RS07880 WP_014663802.1 1540264..1540848(+) (rok) [Bacillus sp. JS]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAGCCTGACTCTCTGCCTGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTGCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCATAACGCGG
CGATTAAAAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAAACTGCAGA
ATCAGCCGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.471

97.423

0.969

Multiple sequence alignment