Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SCI_RS02230 Genome accession   NC_022238
Coordinates   433622..434398 (-) Length   258 a.a.
NCBI ID   WP_006267569.1    Uniprot ID   A0A3Q9F2Q4
Organism   Streptococcus constellatus subsp. pharyngis C1050     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 428622..439398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCI_RS02200 (SCI_0437) - 428975..429970 (+) 996 WP_006267397.1 sensor histidine kinase -
  SCI_RS02205 (SCI_0438) vraR 429972..430604 (+) 633 WP_006267191.1 response regulator transcription factor Regulator
  SCI_RS02210 (SCI_0439) - 430651..432051 (+) 1401 WP_020997632.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  SCI_RS02215 (SCI_0440) - 432053..432445 (+) 393 WP_020997633.1 S1 RNA-binding domain-containing protein -
  SCI_RS02220 (SCI_0441) - 432565..432882 (-) 318 WP_006269734.1 DUF960 domain-containing protein -
  SCI_RS02225 (SCI_0442) - 433002..433535 (-) 534 WP_003070217.1 DUF402 domain-containing protein -
  SCI_RS02230 (SCI_0443) recX 433622..434398 (-) 777 WP_006267569.1 recombination regulator RecX Regulator
  SCI_RS02235 (SCI_0444) - 434462..435238 (-) 777 WP_006267458.1 aminoglycoside 3'-phosphotransferase -
  SCI_RS02240 (SCI_0445) rlmD 435295..436659 (+) 1365 WP_006267121.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SCI_RS02245 (SCI_0446) - 437517..438449 (-) 933 WP_006267664.1 nitronate monooxygenase -
  SCI_RS02250 (SCI_0447) - 438784..439017 (+) 234 WP_003070208.1 DUF1858 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30495.15 Da        Isoelectric Point: 9.0503

>NTDB_id=50596 SCI_RS02230 WP_006267569.1 433622..434398(-) (recX) [Streptococcus constellatus subsp. pharyngis C1050]
MKITKIEKKKRLYLLELDEIDKLYITEDTIVHFMLSKGMNISEQELKEIQDYAQFSYGKNLALYYLSFKQRTVKEVRDYL
TKYEISLDTIEKVLTILIKDNWIDDRQYAYSFIHSNLLSGDKGAFVLKQKLAQKGITAPIIDEELCKFDFTEVSQKVAAK
LLRNYQSKLPSKALQDKILQSMMNKGFSYTEAKAAYQTLDIKEDEETQQKLLYKELDKQYRKYSKKYDEYELKQRLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=50596 SCI_RS02230 WP_006267569.1 433622..434398(-) (recX) [Streptococcus constellatus subsp. pharyngis C1050]
ATGAAAATCACTAAAATTGAAAAGAAAAAGCGTCTCTATCTTTTAGAATTGGACGAAATTGACAAACTTTACATCACTGA
AGATACTATCGTTCACTTTATGTTATCAAAAGGCATGAATATCAGTGAGCAAGAATTAAAAGAAATTCAGGACTACGCAC
AGTTTTCTTACGGAAAAAATCTAGCTCTATATTATCTTTCTTTCAAGCAAAGAACTGTCAAAGAAGTGCGGGATTATTTG
ACAAAATACGAGATTTCCTTAGATACCATCGAGAAAGTGCTAACGATTCTCATAAAAGATAACTGGATAGATGACAGACA
ATATGCTTATTCCTTTATTCATTCCAATCTTCTATCTGGTGATAAAGGTGCTTTTGTCCTCAAGCAAAAATTGGCTCAAA
AAGGTATCACAGCTCCTATTATTGATGAAGAATTATGCAAATTTGATTTTACAGAAGTAAGTCAAAAAGTTGCTGCAAAA
CTACTCCGCAACTATCAAAGCAAACTACCAAGTAAGGCCCTGCAGGATAAAATTCTTCAATCTATGATGAACAAAGGCTT
TTCCTATACCGAAGCTAAGGCAGCTTATCAAACCTTAGACATCAAAGAAGATGAGGAAACTCAGCAGAAATTACTGTACA
AAGAATTAGATAAGCAATACCGCAAATATTCTAAAAAATATGACGAATATGAGTTAAAACAACGCCTCACCCAAGCACTC
GCTCGCAAAGGTTATGATTTTTCTGATATTGCTAGCGCTCTCAGAGAATATCTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(81-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9F2Q4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.094

100

0.36

Multiple sequence alignment