Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I6L85_RS04635 Genome accession   NZ_CP077248
Coordinates   927100..927564 (+) Length   154 a.a.
NCBI ID   WP_008809192.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1455     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 922100..932564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L85_RS04610 (I6L85_04610) pyrF 922560..923252 (+) 693 WP_008809197.1 orotidine-5'-phosphate decarboxylase -
  I6L85_RS04615 (I6L85_04615) pyrE 923331..923960 (+) 630 WP_111723774.1 orotate phosphoribosyltransferase -
  I6L85_RS04620 (I6L85_04620) - 924095..925648 (+) 1554 WP_111724296.1 hypothetical protein -
  I6L85_RS04625 (I6L85_04625) - 925651..926403 (+) 753 WP_111723773.1 DUF4336 domain-containing protein -
  I6L85_RS04630 (I6L85_04630) - 926438..927091 (+) 654 WP_111723772.1 uracil-DNA glycosylase -
  I6L85_RS04635 (I6L85_04635) mutX 927100..927564 (+) 465 WP_008809192.1 8-oxo-dGTP diphosphatase Machinery gene
  I6L85_RS04640 (I6L85_04640) - 927577..928845 (+) 1269 WP_111723771.1 dihydroorotase -
  I6L85_RS04645 (I6L85_04645) nt5e 928987..931167 (+) 2181 WP_111723770.1 cell surface ecto-5'-nucleotidase Nt5e -
  I6L85_RS04650 (I6L85_04650) plsY 931185..931829 (-) 645 WP_111723769.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17801.23 Da        Isoelectric Point: 4.2903

>NTDB_id=505916 I6L85_RS04635 WP_008809192.1 927100..927564(+) (mutX) [Streptococcus gordonii strain FDAARGOS 1455]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLELGETPQECAAREILEETGLKAKPVLKGIITFPEFTPNLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=505916 I6L85_RS04635 WP_008809192.1 927100..927564(+) (mutX) [Streptococcus gordonii strain FDAARGOS 1455]
ATGGTTCAGTTAGCAACGATTTGTTATATTGATAATGGCCGGGAGTTTCTCATGCTACACCGTAACAAAAAGCCCAATGA
TGTCCATGCTGGGAAGTGGATTGGTGTTGGTGGCAAGCTAGAGCTAGGAGAAACTCCGCAGGAATGCGCTGCGCGCGAGA
TTCTAGAGGAGACGGGACTAAAGGCCAAGCCCGTTCTCAAAGGCATTATTACTTTTCCAGAGTTTACTCCTAATTTGGAC
TGGTATACCTATGTTTTCAAGGTGACTGAGTTTGAGGGGGAACTGATTGACTGCAATGAAGGTACTTTGGAATGGGTGCC
CTATGACCAGGTCTTATCTAAACCAACCTGGGAAGGCGATCATACCTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCTGCAAAGTTTGTTTATGACGGGGATAAACTGCTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

92.857

100

0.929