Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   I6L85_RS02080 Genome accession   NZ_CP077248
Coordinates   400941..401399 (+) Length   152 a.a.
NCBI ID   WP_012130789.1    Uniprot ID   A8AZ12
Organism   Streptococcus gordonii strain FDAARGOS 1455     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 395941..406399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L85_RS02055 (I6L85_02055) glmS 396040..397851 (+) 1812 WP_111724096.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
  I6L85_RS02060 (I6L85_02060) - 397967..398491 (+) 525 WP_111724310.1 hypothetical protein -
  I6L85_RS02065 (I6L85_02065) scrK 398732..399631 (+) 900 WP_045773521.1 fructokinase ScrK -
  I6L85_RS02070 (I6L85_02070) - 399680..400090 (+) 411 WP_111724095.1 peptide deformylase -
  I6L85_RS02075 (I6L85_02075) - 400100..400669 (+) 570 WP_111724094.1 hypothetical protein -
  I6L85_RS02080 (I6L85_02080) rcrR 400941..401399 (+) 459 WP_012130789.1 MarR family transcriptional regulator Regulator
  I6L85_RS02085 (I6L85_02085) rcrP 401392..403158 (+) 1767 WP_111724093.1 ABC transporter ATP-binding protein Regulator
  I6L85_RS02090 (I6L85_02090) rcrQ 403148..404905 (+) 1758 WP_111724092.1 ABC transporter ATP-binding protein Regulator
  I6L85_RS02095 (I6L85_02095) manA 405066..406010 (+) 945 WP_111724091.1 mannose-6-phosphate isomerase, class I -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17556.33 Da        Isoelectric Point: 8.5458

>NTDB_id=505886 I6L85_RS02080 WP_012130789.1 400941..401399(+) (rcrR) [Streptococcus gordonii strain FDAARGOS 1455]
MEKPLLEFKRFGRKTQRIIEKRAKVCGMEFMGGPQGQVLHIVSHRAKRGLSTFIRDIEHELDISKSVASNLIKRMEKNGS
IFLEVSETDKRAKMIHLTAQSKQQLKELHDFFNEIDRCLLQGVSEEELATFTLVMAKFHQNIEKLESEDANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=505886 I6L85_RS02080 WP_012130789.1 400941..401399(+) (rcrR) [Streptococcus gordonii strain FDAARGOS 1455]
TTGGAAAAGCCTTTATTAGAATTCAAACGCTTTGGCCGAAAGACTCAACGGATCATAGAGAAACGCGCCAAGGTTTGTGG
GATGGAATTTATGGGAGGTCCACAAGGTCAAGTTCTTCATATCGTATCTCACCGAGCGAAGAGAGGACTTTCGACCTTTA
TCAGAGATATTGAGCATGAGTTAGATATTTCTAAGTCGGTGGCCAGCAATCTAATCAAACGGATGGAAAAAAATGGATCC
ATCTTTCTTGAGGTAAGCGAGACAGATAAAAGGGCTAAGATGATTCATTTAACAGCCCAGTCTAAACAACAATTGAAAGA
GTTACATGATTTTTTTAATGAAATCGATCGCTGTCTCCTCCAGGGTGTTTCAGAAGAAGAATTGGCAACCTTCACTCTGG
TTATGGCGAAATTCCACCAAAATATTGAGAAATTAGAAAGCGAGGATGCCAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AZ12

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

40.411

96.053

0.388