Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ICC24_RS06260 Genome accession   NZ_CP065029
Coordinates   1257917..1258087 (+) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain LCDD6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1252917..1263087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS06230 (ICC24_06225) - 1253785..1254597 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  ICC24_RS06235 (ICC24_06230) - 1254779..1254958 (+) 180 WP_003180573.1 YjzC family protein -
  ICC24_RS06240 (ICC24_06235) - 1255029..1255223 (-) 195 WP_009328851.1 YjzD family protein -
  ICC24_RS06245 (ICC24_06240) - 1255455..1256189 (+) 735 WP_145614130.1 hypothetical protein -
  ICC24_RS06250 (ICC24_06245) - 1256276..1256851 (+) 576 WP_009328849.1 hypothetical protein -
  ICC24_RS06255 (ICC24_06250) med 1256938..1257891 (+) 954 WP_044790144.1 BMP family ABC transporter substrate-binding protein Regulator
  ICC24_RS06260 (ICC24_06255) comZ 1257917..1258087 (+) 171 WP_031314537.1 ComZ family protein Regulator
  ICC24_RS06265 (ICC24_06260) - 1258139..1258378 (-) 240 WP_069500393.1 hypothetical protein -
  ICC24_RS06270 (ICC24_06265) - 1258548..1259486 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  ICC24_RS06275 (ICC24_06270) fabF 1259508..1260746 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  ICC24_RS06280 (ICC24_06275) - 1260834..1261622 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  ICC24_RS06285 (ICC24_06280) - 1261814..1262788 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=505867 ICC24_RS06260 WP_031314537.1 1257917..1258087(+) (comZ) [Bacillus licheniformis strain LCDD6]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=505867 ICC24_RS06260 WP_031314537.1 1257917..1258087(+) (comZ) [Bacillus licheniformis strain LCDD6]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75