Detailed information NTG0505790

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: I6L84_RS05165
• Genome accession: NZ_CP077224
• Coordinates: 1038798..1042079 (-)
• Length: 1093 a.a.
• NCBI ID: WP_060553365.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain FDAARGOS 1454
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1033798..1047079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L84_RS05155 (I6L84_05155)	-	1034816..1035121 (-)	306	WP_060553367.1	DUF4298 domain-containing protein	-
I6L84_RS05160 (I6L84_05160)	rexA	1035151..1038801 (-)	3651	WP_060553366.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
I6L84_RS05165 (I6L84_05165)	rexB	1038798..1042079 (-)	3282	WP_060553365.1	ATP-dependent nuclease subunit B	Machinery gene
I6L84_RS05170 (I6L84_05170)	-	1042471..1045644 (-)	3174	WP_060553364.1	CocE/NonD family hydrolase	-

Sequence

Protein

• Length: 1093 a.a.
• Molecular weight: 124477.46 Da
• Isoelectric Point: 4.8938

>NTDB_id=505790 I6L84_RS05165 WP_060553365.1 1038798..1042079(-) (rexB) [Streptococcus gordonii strain FDAARGOS 1454]
MKLLYTDIRHSLTKVLVAEAESLVAAGKRVFYIAPNSLSFEKERAVLECLKNKASFAITVTRFAQMARYFVLNDVRKGQN
LDDIGLGMLIYRTLTELDDGELKVYGRIKKDPQFIQQLMDLYHELQTAQMSFVDLEFLEEPEKREDLVKIFTAVTAALNK
GDFDSSSQIAAFAQHILAGDTDEELADLALVIDGFTRFSAEEEYLVGLLHRKGVEIVIGTYASQKAYRAAFREGNLYQAS
VDFLRKLAEDYQVKPDYIPHAEAEDAFGQISKILESRYDFSESTVSLSETDRSRLQIWATMNQKEELEYVAKSIRQRVHD
GVRYKDIRLLLGDVEAYQLQLKTIFDQYQIPYYLGRSESMAQHPLVQFVESLERLKRYNFQLEDLLNLLKTGLYGDLTQE
ELDHFEQYLRFADIKGAGKLAKDFTANSQGKFDLDRLNHIRRRVMTPLQDFFKSRSQTASGLLAKFTEFVQAARLSDNLT
ALLQEESQQEQERHEEVWKAFSHVLEQFAQVFAESKVKLDDFLALVLSGMLLSNYRMVPATVDVVKVQSYDLIEPLAAPY
VYAIGLTQERFPKIAQNKSLLSDEDRARLNEETDSQAELQIASSENLKKNRYTALSLMNSATKELVLSAPALVNEVEDSM
STYLLELTAAPLSLPIIVKKPQASSDDIGSYRALLSQIIELHQEEIDREWTAEEQTFLAVAVRVLRKKLAAEGISIPQIS
KELKTESLQPETLHALYPKDQPLRLSVSALSEYFKNQYGYFIKYVLGLQEEWTIHPDARSHGNFLHRIFEKVLQEDTSRD
FDQRLEVAIDETMRETEFESLYNESSESLFTRQLLLDTAKSTSQVLAQSAGIETIGEETVFGNSKEPFLILEDGRAVSVR
GKVDRIDRLLADGSLGVVDYKSSETKFSYEKFFNGLNSQLPTYLAAIQELQGQQEGRDLFGAMYLQMTEPIVALKDTKEL
GDAVKEVAKTMQYKGLFLADKLASLGPVYEKSKVNSLSQEELAVLLAYNEILYKKVAEGILAGHFEVNPYTENGRNIAPY
VDQFKAITGFEANRHLGQARQLDKLDLSKFEKCPVGEKLRQAWIEKMREELKK

Nucleotide

• Length: 3282 bp

>NTDB_id=505790 I6L84_RS05165 WP_060553365.1 1038798..1042079(-) (rexB) [Streptococcus gordonii strain FDAARGOS 1454]
ATGAAATTACTTTATACAGATATTCGCCATTCTTTGACCAAGGTTTTAGTGGCTGAGGCTGAGAGTTTGGTGGCGGCTGG
TAAGCGAGTCTTTTATATTGCGCCAAATTCGCTTTCTTTTGAGAAGGAGCGGGCGGTTTTGGAGTGCCTGAAGAACAAGG
CTTCCTTTGCCATTACGGTGACGCGCTTTGCCCAGATGGCTCGGTATTTTGTCCTCAATGATGTCCGAAAAGGGCAGAAT
TTGGACGATATTGGTCTGGGAATGCTGATTTATCGGACCTTGACAGAGTTAGATGATGGAGAGCTTAAGGTCTATGGCAG
GATTAAGAAGGATCCACAGTTTATCCAGCAACTGATGGATCTTTACCATGAACTGCAGACAGCCCAGATGTCCTTTGTGG
ATTTGGAATTTCTCGAGGAGCCTGAGAAGCGGGAGGATTTGGTCAAGATTTTTACTGCAGTGACTGCTGCTCTGAATAAG
GGCGATTTTGATTCGTCTTCTCAGATTGCTGCTTTTGCCCAGCATATTCTGGCTGGTGATACAGACGAGGAATTGGCAGA
TTTGGCCCTGGTCATCGATGGTTTTACTCGTTTTTCTGCCGAAGAGGAATACCTGGTCGGTCTCCTGCATCGAAAAGGCG
TGGAGATTGTTATTGGGACCTATGCTAGCCAAAAAGCCTACCGAGCAGCCTTTCGTGAGGGCAATCTCTATCAAGCTAGT
GTGGACTTCCTGAGAAAGCTGGCCGAGGACTATCAGGTCAAGCCTGACTATATCCCTCATGCGGAAGCAGAAGATGCCTT
TGGACAGATTTCCAAGATCTTGGAGAGTCGTTATGACTTTTCAGAATCAACGGTGAGTCTGAGTGAGACAGATCGCTCGC
GCCTTCAAATCTGGGCTACTATGAACCAGAAAGAAGAGCTGGAGTATGTGGCTAAGTCCATCCGGCAGCGAGTTCATGAT
GGTGTGCGTTATAAGGATATTCGTCTACTCTTGGGGGACGTGGAAGCCTACCAGCTTCAGCTTAAGACCATTTTTGACCA
ATATCAGATTCCTTACTATTTAGGGCGGAGCGAGTCAATGGCTCAGCATCCGCTGGTTCAGTTTGTTGAGTCCTTAGAGC
GACTCAAGCGCTATAATTTCCAACTGGAAGACCTGCTCAACCTCTTAAAGACAGGACTCTATGGAGACTTGACTCAGGAA
GAGCTGGATCATTTTGAGCAATATCTGCGCTTTGCGGACATTAAGGGAGCCGGCAAGCTAGCCAAGGATTTCACGGCTAA
TAGCCAAGGGAAATTTGACCTAGACCGTCTCAATCATATTCGCCGCCGGGTTATGACTCCGCTACAAGACTTTTTCAAAT
CCCGCAGCCAGACGGCGTCGGGGCTCTTAGCTAAGTTTACGGAGTTCGTCCAAGCAGCCCGTTTGTCTGACAATTTGACA
GCTCTGCTGCAGGAAGAAAGTCAGCAAGAACAGGAACGCCATGAGGAAGTCTGGAAGGCTTTCAGCCATGTCTTAGAGCA
GTTTGCTCAGGTCTTTGCAGAAAGCAAGGTCAAACTGGATGATTTTCTAGCTTTGGTCCTCTCAGGAATGCTTTTGTCCA
ACTATCGGATGGTGCCGGCGACAGTAGATGTGGTTAAGGTTCAGTCTTATGACCTGATAGAACCTTTAGCAGCTCCTTAC
GTCTATGCAATCGGACTGACTCAAGAGCGTTTTCCGAAAATCGCGCAAAACAAGAGTTTGCTCAGTGATGAAGATCGGGC
TCGACTTAATGAAGAGACGGATTCTCAGGCAGAACTGCAGATTGCTAGCTCAGAAAATCTCAAGAAGAATCGCTATACAG
CTCTATCACTGATGAATTCTGCCACCAAAGAGCTGGTCTTGTCTGCGCCAGCCTTGGTCAATGAAGTAGAGGACAGCATG
TCGACCTATCTGCTGGAATTGACTGCAGCTCCGCTTTCCTTGCCTATCATTGTCAAAAAGCCTCAAGCTTCCAGTGATGA
TATTGGCAGCTACCGAGCTCTCTTGTCTCAAATCATCGAACTCCACCAAGAGGAGATTGACCGAGAGTGGACAGCAGAGG
AGCAAACTTTTTTGGCGGTGGCTGTGCGGGTTCTCCGCAAGAAGTTAGCAGCAGAAGGCATCAGCATTCCGCAAATCAGC
AAGGAACTGAAAACGGAGTCTCTGCAACCGGAAACTCTGCATGCCCTTTATCCAAAAGATCAGCCCCTCCGACTTTCAGT
CTCTGCTCTAAGCGAATACTTTAAAAATCAATATGGCTATTTCATCAAATACGTTCTGGGATTACAGGAAGAATGGACCA
TCCATCCGGATGCTAGAAGCCACGGGAATTTTCTGCATCGAATTTTTGAAAAAGTACTTCAGGAGGATACTAGTCGAGAC
TTTGACCAACGACTAGAAGTGGCAATAGACGAAACCATGCGGGAGACTGAATTTGAAAGTCTCTACAATGAATCTAGCGA
GAGTCTCTTTACTCGTCAGTTGCTGCTAGATACAGCTAAGTCAACGAGCCAAGTTTTGGCCCAATCAGCTGGGATTGAAA
CGATTGGGGAAGAAACAGTCTTTGGGAACAGTAAAGAGCCTTTCCTTATCTTGGAAGATGGCAGAGCTGTTAGTGTTCGA
GGCAAGGTGGATAGAATTGACCGATTGCTAGCTGATGGGAGTCTGGGAGTCGTGGACTATAAGTCCAGCGAGACTAAGTT
TAGCTATGAAAAATTTTTTAATGGTCTGAATTCTCAGCTTCCGACTTATCTAGCGGCTATCCAGGAACTCCAAGGTCAGC
AGGAAGGTAGAGATCTTTTCGGTGCCATGTACTTGCAAATGACGGAGCCTATTGTCGCCCTTAAAGATACCAAAGAGTTA
GGAGATGCAGTCAAGGAAGTTGCTAAAACCATGCAGTACAAGGGTCTCTTTTTAGCAGACAAGCTGGCCTCTTTGGGTCC
TGTTTATGAAAAGAGCAAGGTTAATAGTCTCAGTCAAGAAGAACTGGCTGTTTTACTTGCTTATAATGAAATTCTCTATA
AAAAAGTAGCTGAAGGTATTCTAGCTGGTCATTTTGAGGTTAATCCCTATACAGAAAATGGTCGGAATATAGCACCTTAT
GTCGATCAGTTTAAGGCTATTACAGGCTTTGAAGCCAATCGTCACCTAGGACAAGCCAGACAGTTAGATAAATTAGATTT
GAGTAAATTTGAAAAATGTCCAGTTGGTGAGAAATTGCGCCAAGCATGGATAGAAAAGATGAGGGAGGAGTTGAAAAAAT
GA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (744-1031)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	57.247	100	0.575