Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I6L84_RS04200 Genome accession   NZ_CP077224
Coordinates   847405..847869 (-) Length   154 a.a.
NCBI ID   WP_048774629.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1454     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 842405..852869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L84_RS04185 (I6L84_04185) plsY 843140..843784 (+) 645 WP_060553533.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
  I6L84_RS04190 (I6L84_04190) nt5e 843802..845982 (-) 2181 WP_060553532.1 cell surface ecto-5'-nucleotidase Nt5e -
  I6L84_RS04195 (I6L84_04195) - 846124..847392 (-) 1269 WP_060553531.1 dihydroorotase -
  I6L84_RS04200 (I6L84_04200) mutX 847405..847869 (-) 465 WP_048774629.1 8-oxo-dGTP diphosphatase Machinery gene
  I6L84_RS04205 (I6L84_04205) - 847878..848531 (-) 654 WP_060553530.1 uracil-DNA glycosylase -
  I6L84_RS04210 (I6L84_04210) - 848566..849318 (-) 753 WP_060553529.1 DUF4336 domain-containing protein -
  I6L84_RS04215 (I6L84_04215) - 849321..850874 (-) 1554 WP_060553597.1 glycosyltransferase family 39 protein -
  I6L84_RS04220 (I6L84_04220) pyrE 851009..851638 (-) 630 WP_060553528.1 orotate phosphoribosyltransferase -
  I6L84_RS04225 (I6L84_04225) pyrF 851717..852409 (-) 693 WP_045503251.1 orotidine-5'-phosphate decarboxylase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17844.25 Da        Isoelectric Point: 4.3590

>NTDB_id=505784 I6L84_RS04200 WP_048774629.1 847405..847869(-) (mutX) [Streptococcus gordonii strain FDAARGOS 1454]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGIITFPEFTPNLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=505784 I6L84_RS04200 WP_048774629.1 847405..847869(-) (mutX) [Streptococcus gordonii strain FDAARGOS 1454]
ATGGTTCAGTTAGCAACGATTTGTTATATTGATAATGGCCGAGAGTTTCTCATGCTGCACCGCAACAAAAAGCCCAATGA
TGTCCATGCTGGGAAGTGGATTGGTGTCGGTGGCAAACTAGAGCGAGGAGAAACCCCGCAGGAATGTGCTGCGCGCGAGA
TTCTAGAGGAAACAGGTCTAAAGGCAAAGCCTGTCCTCAAGGGCATTATTACTTTCCCAGAGTTTACTCCCAACTTGGAC
TGGTACACCTATGTTTTTAAGGTGACTGAGTTCGAGGGGGAACTGATTGACTGCAATGAAGGGACTCTAGAATGGGTGCC
CTATGATCAGGTTTTGTCTAAACCAACCTGGGAAGGCGATCATACCTTTGTCGAATGGCTTTTAGAAGACAAGCCTTTCT
TTTCAGCAAAGTTTGTTTATGACGGGGATAAGCTCTTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

93.506

100

0.935