Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | MY9_RS00240 | Genome accession | NC_017743 |
| Coordinates | 44704..44994 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. JS | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39704..49994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MY9_RS00200 (MY9_0029) | darA | 39727..40056 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| MY9_RS00205 (MY9_0030) | - | 40069..40509 (+) | 441 | WP_014662474.1 | YaaR family protein | - |
| MY9_RS00210 (MY9_0031) | holB | 40521..41510 (+) | 990 | WP_014662475.1 | DNA polymerase III subunit delta' | - |
| MY9_RS00215 (MY9_0032) | ricT | 41513..42340 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| MY9_RS00220 (MY9_0033) | yabA | 42355..42714 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| MY9_RS00225 (MY9_0034) | - | 42773..43516 (+) | 744 | WP_014662476.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| MY9_RS00230 (MY9_0035) | - | 43503..43802 (+) | 300 | WP_014662477.1 | GIY-YIG nuclease family protein | - |
| MY9_RS00235 (MY9_0036) | rsmI | 43777..44655 (+) | 879 | WP_014662478.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MY9_RS00240 (MY9_0037) | abrB | 44704..44994 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| MY9_RS00245 (MY9_0038) | metG | 45489..47483 (+) | 1995 | WP_014662479.1 | methionine--tRNA ligase | - |
| MY9_RS00250 (MY9_0039) | - | 47562..48329 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| MY9_RS00255 (MY9_0040) | - | 48485..49798 (+) | 1314 | WP_014662480.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=50573 MY9_RS00240 WP_003226760.1 44704..44994(-) (abrB) [Bacillus sp. JS]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=50573 MY9_RS00240 WP_003226760.1 44704..44994(-) (abrB) [Bacillus sp. JS]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTCGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTCGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |