Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IYR97_RS01755 Genome accession   NZ_CP064943
Coordinates   417586..417987 (+) Length   133 a.a.
NCBI ID   WP_027914036.1    Uniprot ID   -
Organism   Pseudomonas fulva strain ZDHY316     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 412586..422987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IYR97_RS01725 (IYR97_01725) - 412716..413720 (-) 1005 WP_027914040.1 aspartate carbamoyltransferase catalytic subunit -
  IYR97_RS01730 (IYR97_01730) pyrR 413733..414251 (-) 519 WP_023533003.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IYR97_RS01735 (IYR97_01735) ruvX 414301..414738 (-) 438 WP_023533019.1 Holliday junction resolvase RuvX -
  IYR97_RS01740 (IYR97_01740) - 414738..415307 (-) 570 WP_027914039.1 YqgE/AlgH family protein -
  IYR97_RS01745 (IYR97_01745) - 415354..416253 (-) 900 WP_027914038.1 energy transducer TonB -
  IYR97_RS01750 (IYR97_01750) gshB 416393..417346 (-) 954 WP_181073870.1 glutathione synthase -
  IYR97_RS01755 (IYR97_01755) pilG 417586..417987 (+) 402 WP_027914036.1 response regulator Regulator
  IYR97_RS01760 (IYR97_01760) pilH 418036..418401 (+) 366 WP_027914035.1 twitching motility response regulator PilH -
  IYR97_RS01765 (IYR97_01765) - 418398..418949 (+) 552 WP_027914034.1 chemotaxis protein CheW -
  IYR97_RS01770 (IYR97_01770) - 418998..421022 (+) 2025 WP_230396039.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14603.87 Da        Isoelectric Point: 5.1550

>NTDB_id=505704 IYR97_RS01755 WP_027914036.1 417586..417987(+) (pilG) [Pseudomonas fulva strain ZDHY316]
MEQPLKVMVIDDSRTIRRTAQMLLSEVGCEVITASDGFDALAKIVDHNPAVIFVDVLMPRLDGYQTCAVIKQNSTFKDVP
VILLSSRDGLFDKARGRVVGSDQFLTKPFTKEELIEAIQAHVPGFATAQQTAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=505704 IYR97_RS01755 WP_027914036.1 417586..417987(+) (pilG) [Pseudomonas fulva strain ZDHY316]
ATGGAACAACCCCTGAAAGTGATGGTGATCGACGATTCACGCACCATTCGCCGCACGGCGCAGATGCTGCTCAGTGAGGT
GGGCTGCGAGGTCATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGATCACAACCCGGCCGTGATCTTCG
TCGATGTCTTGATGCCGCGCCTGGACGGCTACCAGACGTGCGCGGTGATCAAGCAGAACAGCACCTTCAAGGACGTCCCG
GTGATTCTGTTGTCGTCGCGCGACGGTTTGTTCGACAAGGCCCGCGGGCGTGTGGTCGGTTCTGATCAGTTTCTGACCAA
GCCGTTTACCAAGGAAGAACTGATCGAGGCAATACAGGCCCATGTGCCTGGGTTTGCCACAGCCCAACAAACAGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.5

90.226

0.609