Detailed information NTG0050568

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPPC18_RS06925
• Genome accession: NC_017742
• Coordinates: 1450062..1451501 (+)
• Length: 479 a.a.
• NCBI ID: WP_000749003.1
• Uniprot ID: -
• Organism: Helicobacter pylori PeCan18
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1445062..1456501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPC18_RS06900 (HPPC18_06955)	glmS	1445690..1447483 (-)	1794	WP_000334342.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPPC18_RS06905 (HPPC18_06960)	-	1447484..1447723 (-)	240	WP_000461847.1	DUF2443 domain-containing protein	-
HPPC18_RS06910 (HPPC18_06965)	-	1447770..1448306 (-)	537	WP_014662438.1	purine-nucleoside phosphorylase	-
HPPC18_RS06915 (HPPC18_06970)	dnaA	1448460..1449833 (+)	1374	WP_000380638.1	chromosomal replication initiator protein DnaA	-
HPPC18_RS06925 (HPPC18_06980)	comH	1450062..1451501 (+)	1440	WP_000749003.1	hypothetical protein	Machinery gene
HPPC18_RS06935 (HPPC18_06985)	-	1451681..1452433 (+)	753	WP_000767540.1	exodeoxyribonuclease III	-
HPPC18_RS06940 (HPPC18_06990)	-	1452430..1453065 (-)	636	WP_000668078.1	outer membrane protein	-
HPPC18_RS06945 (HPPC18_06995)	-	1453069..1453407 (-)	339	WP_000837071.1	hypothetical protein	-
HPPC18_RS06950 (HPPC18_07000)	recG	1453484..1455355 (+)	1872	WP_001156184.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54539.30 Da
• Isoelectric Point: 6.8967

>NTDB_id=50568 HPPC18_RS06925 WP_000749003.1 1450062..1451501(+) (comH) [Helicobacter pylori PeCan18]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPAIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVNPANEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTSNADASENNESNENRDNVEKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSVLKRVDEDKQTTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=50568 HPPC18_RS06925 WP_000749003.1 1450062..1451501(+) (comH) [Helicobacter pylori PeCan18]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAGACAGGTTTTAGGCGTTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTGCTATTCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAGGAACCGCACTCAAACCCAATACCTTCTTTAAACGCACCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAACCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTTTTTGTAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATGCGA
GTGAAAACAACGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCCGTTAGAGATCCTAATATCAAGGAATTTGCG
TGCGGGAAATGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCGTTTTAAAACGCGTTGATGAAGACAAACA
GACTACGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAGCGCCCCAAACAAGACGACC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.484	100	0.925