Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   SII_RS09035 Genome accession   NC_022237
Coordinates   1854620..1855060 (+) Length   146 a.a.
NCBI ID   WP_041823295.1    Uniprot ID   -
Organism   Streptococcus intermedius C270     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1849620..1860060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SII_RS09005 - 1849785..1849958 (-) 174 Protein_1759 CPBP family intramembrane glutamate endopeptidase -
  SII_RS09010 (SII_1772) - 1849963..1850517 (-) 555 WP_003075291.1 DNA-3-methyladenine glycosylase I -
  SII_RS09015 (SII_1773) ruvA 1850527..1851117 (-) 591 WP_020999238.1 Holliday junction branch migration protein RuvA Machinery gene
  SII_RS09020 (SII_1774) - 1851287..1851793 (+) 507 WP_020999239.1 helix-turn-helix domain-containing protein -
  SII_RS09025 (SII_1775) - 1851777..1852286 (+) 510 WP_041823294.1 RDD family protein -
  SII_RS09030 (SII_1776) hexB 1852432..1854378 (-) 1947 WP_020999241.1 DNA mismatch repair endonuclease MutL Machinery gene
  SII_RS09035 (SII_1777) brsR 1854620..1855060 (+) 441 WP_041823295.1 LytTR family DNA-binding domain-containing protein Regulator
  SII_RS09040 (SII_1778) - 1855057..1855515 (+) 459 WP_020999243.1 DUF3021 domain-containing protein -
  SII_RS09045 (SII_1779) hexA 1855656..1858214 (-) 2559 WP_020999244.1 DNA mismatch repair protein MutS Machinery gene
  SII_RS09050 (SII_1780) argR 1858377..1858817 (-) 441 WP_003075336.1 arginine repressor -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16941.69 Da        Isoelectric Point: 7.3971

>NTDB_id=50568 SII_RS09035 WP_041823295.1 1854620..1855060(+) (brsR) [Streptococcus intermedius C270]
MKVQMHIDEKFSEEKIIIEAPVLSDSVQQLLTFAQHIGKNKTIRAKKEEEIYLLNSTEIQRVYTENRQVWAETATDTYLL
GLPLYQVLELLPTDFLQISQSEIINIKHIDHLKLTGSGLIQIAMKNGQITYSSRRYLKVIKEKLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=50568 SII_RS09035 WP_041823295.1 1854620..1855060(+) (brsR) [Streptococcus intermedius C270]
ATGAAAGTTCAAATGCATATTGACGAAAAATTTTCAGAAGAAAAGATCATTATTGAAGCGCCTGTTTTGTCGGATTCCGT
TCAACAACTACTAACATTTGCTCAACATATCGGTAAAAATAAAACCATTCGAGCAAAAAAAGAGGAGGAAATTTACCTAC
TAAATAGCACGGAGATACAACGCGTCTATACTGAAAATCGGCAAGTTTGGGCCGAAACAGCAACAGACACTTATCTCTTA
GGGCTTCCACTTTATCAAGTTTTGGAATTGCTTCCCACTGATTTTCTACAGATTTCCCAATCTGAAATCATTAACATCAA
ACATATCGATCATCTGAAATTGACTGGTAGTGGTCTGATTCAGATTGCAATGAAAAACGGTCAGATAACTTATTCATCTC
GCCGTTATCTCAAAGTCATAAAGGAGAAATTACAGCTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37

Multiple sequence alignment