Detailed information NTG0505569

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: I0K03_RS25210
• Genome accession: NZ_CP064875
• Coordinates: 4929790..4931139 (-)
• Length: 449 a.a.
• NCBI ID: WP_200203503.1
• Uniprot ID: -
• Organism: Bacillus toyonensis strain P18
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4924790..4936139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I0K03_RS25190 (I0K03_25190)	secA	4925119..4927626 (-)	2508	WP_000579396.1	preprotein translocase subunit SecA	-
I0K03_RS25195 (I0K03_25195)	hpf	4927901..4928443 (-)	543	WP_000671188.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
I0K03_RS25200 (I0K03_25200)	cspC	4928762..4928959 (-)	198	WP_002045823.1	cold shock protein CspC	-
I0K03_RS25205 (I0K03_25205)	-	4929086..4929790 (-)	705	WP_200203501.1	ComF family protein	-
I0K03_RS25210 (I0K03_25210)	comFA	4929790..4931139 (-)	1350	WP_200203503.1	ATP-dependent helicase ComFA	Machinery gene
I0K03_RS25215 (I0K03_25215)	-	4931266..4932660 (-)	1395	WP_142312446.1	NlpC/P60 family protein	-
I0K03_RS25220 (I0K03_25220)	-	4932821..4933135 (-)	315	WP_097927503.1	helix-turn-helix domain-containing protein	-
I0K03_RS25225 (I0K03_25225)	-	4933307..4934149 (-)	843	WP_000844774.1	DegV family protein	-
I0K03_RS25230 (I0K03_25230)	-	4934388..4935023 (+)	636	WP_000926675.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50962.64 Da
• Isoelectric Point: 9.4462

>NTDB_id=505569 I0K03_RS25210 WP_200203503.1 4929790..4931139(-) (comFA) [Bacillus toyonensis strain P18]
MLSGKQLLLEELSTDVRDNLDDLKKKGEVVCVQGVKNKASTYMCQRCGNIAQRLFSSFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAEKEGEMDVNPLQWKGNLSTGQELAAQGVMEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLKEVFPNINVAALYGGSLDREQDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVKQAM
KEKAACIYLTATPDEEWKRNLRKGKRKGIVVSGRYHRHPLPVPKFCWCGNWKKSLINKRIPQVLLQWLKVYLNKKHPIFL
FVPHVRYIEEMSRLLKLLDDRVAGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGTEEEIFSESALV
QIAGRVGRSFEEPYGEVIYFHYGKTEAMVRAKKHIRSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=505569 I0K03_RS25210 WP_200203503.1 4929790..4931139(-) (comFA) [Bacillus toyonensis strain P18]
ATGTTATCTGGGAAACAGTTATTATTAGAAGAACTCTCTACAGACGTACGGGATAATTTAGATGATTTGAAGAAGAAGGG
AGAGGTCGTATGTGTACAAGGTGTAAAAAATAAGGCTTCTACATATATGTGTCAGCGTTGCGGAAATATAGCACAAAGAC
TCTTTTCGTCATTTTTGTGTAAAAGGTGTAGTAAAGTCTGCACATATTGCCGGAAGTGCATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTGCCGAAAAAGAGGGAGAAATGGATGTAAATCCGTTACAGTGGAAAGGAAATTT
ATCTACTGGCCAGGAGTTGGCTGCGCAAGGTGTTATGGAGGCTGTTAAACAGAAAGAATCGTTTTTTATTTGGGCTGTGT
GCGGCGCTGGAAAAACAGAAATGTTGTTTTATGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTACTTGAATTAGCACCGAGATTGAAAGAAGTATTTCCGAATATAAATGTAGCTGCTTTATACGG
TGGGAGTTTAGATCGGGAACAAGATGCAGCGTTAGTCGTTGCGACCACCCATCAGCTATTGCGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAAATAGATGCCTTTCCATACCATGCAGATCAAATGTTGCAGTATGCGGTAAAACAAGCGATG
AAAGAGAAGGCGGCATGTATTTATTTAACTGCAACTCCAGATGAAGAGTGGAAGCGTAACCTTAGAAAGGGAAAACGAAA
AGGTATCGTTGTTTCTGGACGGTATCACCGTCATCCGTTGCCAGTCCCCAAATTTTGCTGGTGCGGAAACTGGAAAAAAA
GCCTCATCAATAAAAGAATTCCTCAAGTTTTACTACAATGGTTAAAAGTATACTTAAATAAAAAGCACCCCATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAGAAATGAGTCGGTTATTGAAGTTGTTAGACGATAGAGTTGCCGGTGTGCATGC
AGAAGATCCAATGAGAAAAGAGAAAGTTGCAGCTTTCAGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AGAGAGGAGTAACGGTGAAAAATTTGCAAGTTGCGGTTTTAGGGACGGAAGAAGAAATATTTTCAGAAAGTGCACTCGTA
CAAATTGCAGGCCGGGTAGGTCGTAGTTTTGAAGAGCCGTATGGAGAGGTCATTTATTTTCATTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACACATTCGAAGTATGAACAAAAATGCGAAAGAACAAGGGTTGATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (106-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.452	98.441	0.497
comFA	Latilactobacillus sakei subsp. sakei 23K	40.695	89.755	0.365