Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I0K03_RS05780 Genome accession   NZ_CP064875
Coordinates   1128953..1129129 (+) Length   58 a.a.
NCBI ID   WP_001003338.1    Uniprot ID   A0A1V6LL20
Organism   Bacillus toyonensis strain P18     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123953..1134129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I0K03_RS05760 (I0K03_05760) clpC 1124276..1126876 (+) 2601 WP_200203753.1 ATP-dependent chaperone ClpB Regulator
  I0K03_RS05765 (I0K03_05765) - 1126913..1127095 (-) 183 WP_200203755.1 YjzD family protein -
  I0K03_RS05770 (I0K03_05770) - 1127252..1127986 (+) 735 WP_000028709.1 hypothetical protein -
  I0K03_RS05775 (I0K03_05775) - 1128016..1128888 (+) 873 WP_200203757.1 NAD(P)-dependent oxidoreductase -
  I0K03_RS05780 (I0K03_05780) comZ 1128953..1129129 (+) 177 WP_001003338.1 ComZ family protein Regulator
  I0K03_RS05785 (I0K03_05785) fabH 1129374..1130306 (+) 933 WP_001100553.1 beta-ketoacyl-ACP synthase III -
  I0K03_RS05790 (I0K03_05790) fabF 1130337..1131575 (+) 1239 WP_000412641.1 beta-ketoacyl-ACP synthase II -
  I0K03_RS05795 (I0K03_05795) - 1131682..1132473 (+) 792 WP_000539318.1 DUF2268 domain-containing protein -
  I0K03_RS05800 (I0K03_05800) - 1132616..1133362 (+) 747 WP_000966122.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6606.76 Da        Isoelectric Point: 4.4963

>NTDB_id=505539 I0K03_RS05780 WP_001003338.1 1128953..1129129(+) (comZ) [Bacillus toyonensis strain P18]
MNEKSMQFLQIAMKHLPEAKAILDSNGIELDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=505539 I0K03_RS05780 WP_001003338.1 1128953..1129129(+) (comZ) [Bacillus toyonensis strain P18]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAGGCAAAGGCAATTTTAGATTCGAATGG
AATTGAGCTTGATATGGAGAAGGCACAACCAGTGTTAGAGTTATTAATGAAAGTTATGAATGAAGCATATGAGCTTGGGA
AAGCAGACAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LL20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.636

94.828

0.603