Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KRH49_RS04970 Genome accession   NZ_CP076843
Coordinates   1014791..1015414 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 55-100-003     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1009791..1020414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRH49_RS04950 (KRH49_04950) rpmG 1011368..1011517 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  KRH49_RS04955 (KRH49_04955) rpsN 1011971..1012240 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  KRH49_RS04960 (KRH49_04960) guaC 1012397..1013374 (+) 978 WP_000688126.1 GMP reductase -
  KRH49_RS04965 (KRH49_04965) - 1013396..1014412 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  KRH49_RS04970 (KRH49_04970) dinR/lexA 1014791..1015414 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  KRH49_RS04975 (KRH49_04975) sosA 1015557..1015790 (+) 234 WP_000499646.1 DNA damage-induced cell division inhibitor SosA -
  KRH49_RS04980 (KRH49_04980) - 1015926..1016165 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  KRH49_RS04985 (KRH49_04985) recP/tkt 1016286..1018274 (+) 1989 WP_000481439.1 transketolase Machinery gene
  KRH49_RS04990 (KRH49_04990) - 1018552..1018794 (+) 243 WP_000246909.1 YneF family protein -
  KRH49_RS04995 (KRH49_04995) - 1018781..1018879 (+) 99 WP_001789897.1 hypothetical protein -
  KRH49_RS05000 (KRH49_05000) - 1018973..1019440 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=505520 KRH49_RS04970 WP_001208755.1 1014791..1015414(-) (dinR/lexA) [Staphylococcus aureus strain 55-100-003]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=505520 KRH49_RS04970 WP_001208755.1 1014791..1015414(-) (dinR/lexA) [Staphylococcus aureus strain 55-100-003]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTATCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657