Detailed information NTG0050530

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: SII_RS06715
• Genome accession: NC_022237
• Coordinates: 1382768..1385149 (-)
• Length: 793 a.a.
• NCBI ID: WP_020998991.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1377768..1390149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS06695 (SII_1318)	stkP	1377839..1379713 (-)	1875	WP_003073669.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator
SII_RS06700 (SII_1319)	-	1379710..1380450 (-)	741	WP_020998988.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
SII_RS06705 (SII_1320)	rsmB	1380469..1381782 (-)	1314	WP_020998989.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
SII_RS06710 (SII_1321)	fmt	1381772..1382707 (-)	936	WP_020998990.1	methionyl-tRNA formyltransferase	-
SII_RS06715 (SII_1322)	priA	1382768..1385149 (-)	2382	WP_020998991.1	primosomal protein N'	Machinery gene
SII_RS06720 (SII_1323)	rpoZ	1385208..1385522 (-)	315	WP_003028415.1	DNA-directed RNA polymerase subunit omega	-
SII_RS06725 (SII_1324)	gmk	1385548..1386174 (-)	627	WP_003078308.1	guanylate kinase	-
SII_RS06730 (SII_1325)	-	1386356..1387963 (-)	1608	WP_020998992.1	ribonuclease Y	-
SII_RS06735 (SII_1326)	-	1388179..1388661 (+)	483	WP_003078346.1	S-ribosylhomocysteine lyase	-

Sequence

Protein

• Length: 793 a.a.
• Molecular weight: 90362.84 Da
• Isoelectric Point: 9.0681

>NTDB_id=50530 SII_RS06715 WP_020998991.1 1382768..1385149(-) (priA) [Streptococcus intermedius C270]
MQIAKVIVDVPLMQTDRPYSYAVPKEFSTMLEIGMRVHVPFGKANRLIQGIVVGLVEERTIGLKEIVEVLDFTPVLNEEQ
LWLAEELRKSVFAYKISILKAMLPGFLNSSYDKILHAQPALTKEDRMLIFGNVDQRYFSSLDKTLQAKVMRLTRQGAIQL
EYQATDQKHIKTEKWYRVHHERLGQLDIPNRAKKKQALRSLLQNQTSLQRLADLKETFSREVIHYFIEQDVLQVIEKEVS
RSETYFENVSATSALVLNEEQKGAVQAITQQIGHTGKPFLLEGVTGSGKTEVYLQVIQEALSRGKTAIMLVPEISLTPQV
TNRFISRFGKKVAILHSGLSNGEKYDEWRKVERGEAQVVVGARSAIFAPLKNIGAIIVDEEHEASYKQDSNPRYHARDVA
LLRAKYNQAVLVLGSATPSLESRARAGKGVYHFLQLTKRANPQAQIPEVEIVDFRDYIGQNEASDFTPVLLEAIKDRLEK
KEQVVLMLNRRGYSSFVMCRECGTVDSCPNCDISLTLHMDTKSMNCHYCGFSKVIPHSCPNCSSRSIRYYGTGTQKAYDE
LAETFPQARILRMDVDTTRKKGSHEQILKKFEERHADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQL
LTQVAGRAGRAEKAGHVIIQSYNPRHYAIVFAKNQDYEGFYAYEMGVRRQLSYPPYYFTVGITLSHKIEAEVIKKSYEVL
NLIRSGLSNKVLVLGPTPKPIARTHNLYHYQLIIKYRFEEHLQDVLNQVLDWTQEKDNQNLRLIIDKEPQNFM

Nucleotide

• Length: 2382 bp

>NTDB_id=50530 SII_RS06715 WP_020998991.1 1382768..1385149(-) (priA) [Streptococcus intermedius C270]
ATGCAGATTGCAAAGGTCATTGTAGATGTTCCTCTAATGCAAACGGATAGACCTTATAGTTATGCAGTTCCGAAAGAATT
TTCGACTATGCTAGAAATTGGTATGCGTGTCCATGTGCCTTTTGGGAAAGCTAATCGCCTGATTCAAGGGATTGTTGTAG
GGTTAGTAGAAGAAAGGACGATAGGATTAAAAGAAATCGTAGAGGTATTGGACTTTACACCAGTTTTAAATGAGGAGCAA
CTGTGGCTAGCAGAAGAATTGAGAAAATCTGTCTTTGCTTACAAAATTTCCATCTTAAAAGCTATGTTGCCTGGTTTTCT
AAACTCCAGTTATGATAAAATTCTCCATGCTCAGCCCGCTTTGACGAAAGAAGATCGAATGCTTATTTTTGGCAATGTAG
ATCAGCGGTATTTTTCATCGCTTGATAAAACACTCCAAGCTAAGGTAATGCGTCTAACACGGCAAGGGGCGATTCAACTC
GAGTATCAGGCAACTGATCAAAAGCATATAAAAACAGAAAAATGGTATCGAGTCCATCATGAGAGATTAGGTCAGTTGGA
CATTCCTAATCGGGCGAAAAAAAAGCAAGCTTTGCGATCGCTTTTACAAAATCAGACCAGTTTGCAACGTCTAGCAGATC
TGAAAGAAACGTTTTCACGAGAGGTTATTCACTATTTTATAGAACAAGACGTTTTGCAAGTCATTGAAAAAGAGGTGAGT
CGCTCTGAAACATATTTTGAGAATGTTTCAGCGACGTCTGCATTGGTGTTAAATGAAGAACAAAAAGGGGCTGTTCAAGC
TATTACTCAGCAAATCGGGCACACAGGGAAGCCATTTCTACTAGAAGGAGTAACAGGGAGTGGCAAAACGGAAGTGTATT
TGCAGGTTATTCAAGAAGCACTCAGCCGTGGTAAAACAGCTATTATGTTAGTTCCTGAAATCTCTTTGACACCGCAAGTT
ACTAATCGCTTTATTTCGCGTTTTGGAAAGAAAGTTGCTATTCTTCATTCGGGACTTTCTAACGGTGAGAAATATGACGA
ATGGCGCAAGGTTGAGCGAGGAGAAGCACAAGTTGTTGTTGGTGCGCGTTCTGCTATTTTTGCTCCATTAAAAAACATTG
GTGCGATTATTGTTGATGAGGAGCATGAGGCAAGCTACAAGCAAGACTCCAATCCACGCTATCATGCACGAGATGTTGCC
TTGCTACGTGCAAAGTACAATCAAGCCGTTTTAGTGCTAGGGTCAGCGACCCCGAGTTTAGAAAGTAGAGCGCGAGCTGG
CAAGGGAGTTTATCATTTTTTACAATTAACTAAACGGGCCAATCCGCAAGCTCAGATTCCTGAAGTAGAAATTGTGGATT
TTCGTGATTATATTGGGCAAAACGAAGCTAGTGATTTTACTCCGGTTCTTTTAGAAGCAATTAAAGACCGATTAGAAAAA
AAAGAGCAAGTTGTTTTGATGTTGAACCGACGAGGCTATTCTAGTTTTGTCATGTGTCGTGAGTGTGGTACGGTTGATAG
TTGTCCAAATTGTGACATTTCTCTGACCTTGCATATGGATACGAAAAGTATGAATTGCCACTATTGTGGTTTTTCAAAGG
TGATTCCTCATAGCTGTCCGAATTGTTCCAGTCGGAGCATTCGTTATTATGGAACGGGGACGCAAAAGGCTTACGATGAA
TTAGCAGAAACTTTTCCGCAAGCTCGAATTTTAAGAATGGATGTTGATACTACTCGTAAAAAAGGTAGTCACGAACAAAT
CTTGAAAAAATTTGAGGAAAGACATGCTGATATTTTACTGGGAACACAGATGATTGCAAAAGGTCTCGATTTTCCAAATG
TGACTCTTGTAGGGGTGCTAAATGCAGATACAGCGTTAAATTTACCAGATTTTCGTTCATCTGAGCGAACCTTTCAACTT
TTAACTCAGGTTGCAGGACGTGCAGGACGAGCTGAAAAAGCAGGACATGTGATTATTCAAAGTTATAATCCAAGACATTA
TGCGATTGTCTTTGCAAAGAATCAGGATTATGAGGGTTTTTATGCCTATGAAATGGGTGTCAGGAGGCAATTATCCTATC
CACCTTATTACTTTACGGTGGGGATTACTTTATCACACAAAATAGAAGCTGAGGTTATTAAAAAGTCATACGAAGTGTTA
AATCTGATACGTTCTGGCTTATCAAATAAGGTTCTGGTATTGGGCCCAACTCCTAAGCCGATTGCCCGTACTCACAATCT
CTATCATTACCAATTGATTATTAAATATCGTTTTGAAGAGCATTTGCAAGATGTTTTAAATCAGGTTTTGGATTGGACAC
AAGAAAAGGACAATCAAAACTTACGTTTAATTATAGACAAGGAACCACAAAATTTTATGTGA

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (695-789)

• Type III restriction enzyme, res subunit (ResIII) (256-419)

• Helicase conserved C-terminal domain (Helicase_C) (561-651)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (508-533)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-104)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	46.173	100	0.472