Detailed information NTG0050524

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSH169_RS07380
• Genome accession: NC_017740
• Coordinates: 1530360..1531799 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751649.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi169
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1525360..1536799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH169_RS07355 (HPSH169_07495)	recG	1526502..1528367 (-)	1866	WP_001158390.1	ATP-dependent DNA helicase RecG	-
HPSH169_RS07360 (HPSH169_07500)	-	1528449..1528793 (+)	345	WP_000836985.1	hypothetical protein	-
HPSH169_RS07365 (HPSH169_07505)	-	1528797..1529432 (+)	636	WP_000668049.1	outer membrane protein	-
HPSH169_RS07370 (HPSH169_07510)	-	1529429..1530181 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HPSH169_RS07380 (HPSH169_07515)	comH	1530360..1531799 (-)	1440	WP_000751649.1	hypothetical protein	Machinery gene
HPSH169_RS07390 (HPSH169_07525)	dnaA	1532020..1533387 (-)	1368	WP_000380574.1	chromosomal replication initiator protein DnaA	-
HPSH169_RS07395 (HPSH169_07530)	-	1533540..1534076 (+)	537	WP_014662167.1	purine-nucleoside phosphorylase	-
HPSH169_RS07400 (HPSH169_07535)	-	1534123..1534362 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPSH169_RS07405 (HPSH169_07540)	glmS	1534363..1536156 (+)	1794	WP_000334329.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55053.09 Da
• Isoelectric Point: 7.0007

>NTDB_id=50524 HPSH169_RS07380 WP_000751649.1 1530360..1531799(-) (comH) [Helicobacter pylori Shi169]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLEMTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTSNADINEHNESNENKDNVEKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
SLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKRGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=50524 HPSH169_RS07380 WP_000751649.1 1530360..1531799(-) (comH) [Helicobacter pylori Shi169]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAATGACCTTAAACCCCAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTATCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGATACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAATACCTCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAACTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AGTTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAGCCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAGGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.923