Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   IXY24_RS16905 Genome accession   NZ_CP064845
Coordinates   3407271..3407669 (+) Length   132 a.a.
NCBI ID   WP_014304317.1    Uniprot ID   -
Organism   Bacillus velezensis strain BZR 277     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3402271..3412669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IXY24_RS16885 (IXY24_16690) - 3404670..3405032 (-) 363 WP_014304320.1 helix-turn-helix domain-containing protein -
  IXY24_RS16890 (IXY24_16695) hxlA 3405264..3405899 (+) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  IXY24_RS16895 (IXY24_16700) hxlB 3405896..3406453 (+) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  IXY24_RS16900 (IXY24_16705) nucA/comI 3406812..3407249 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  IXY24_RS16905 (IXY24_16710) nin/comJ 3407271..3407669 (+) 399 WP_014304317.1 competence protein ComJ Regulator
  IXY24_RS16910 (IXY24_16715) - 3407710..3407928 (-) 219 Protein_3312 family 1 glycosylhydrolase -
  IXY24_RS16915 - 3407927..3408205 (-) 279 WP_107890409.1 family 1 glycosylhydrolase -
  IXY24_RS16920 (IXY24_16725) - 3408147..3408422 (-) 276 WP_369719109.1 YckD family protein -
  IXY24_RS16925 (IXY24_16730) - 3408539..3408973 (-) 435 WP_057080003.1 RDD family protein -
  IXY24_RS16930 (IXY24_16735) - 3408988..3410124 (-) 1137 WP_069013092.1 zinc-dependent alcohol dehydrogenase -
  IXY24_RS16935 (IXY24_16740) - 3410189..3411391 (-) 1203 WP_057080005.1 GTP-binding protein -
  IXY24_RS16940 - 3411544..3411669 (+) 126 Protein_3318 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15049.01 Da        Isoelectric Point: 4.6564

>NTDB_id=505234 IXY24_RS16905 WP_014304317.1 3407271..3407669(+) (nin/comJ) [Bacillus velezensis strain BZR 277]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVFRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=505234 IXY24_RS16905 WP_014304317.1 3407271..3407669(+) (nin/comJ) [Bacillus velezensis strain BZR 277]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCTTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.519

97.727

0.758