Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | KQ255_RS10945 | Genome accession | NZ_CP076821 |
| Coordinates | 2238630..2239010 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain UC22850 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2233630..2244010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ255_RS10915 (KQ255_10860) | kdsB | 2234533..2235294 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| KQ255_RS10920 (KQ255_10865) | - | 2235306..2236286 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| KQ255_RS10925 (KQ255_10870) | - | 2236298..2236639 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| KQ255_RS10930 (KQ255_10875) | - | 2236657..2237430 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| KQ255_RS10935 (KQ255_10880) | - | 2237468..2238076 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| KQ255_RS10940 (KQ255_10885) | - | 2238086..2238640 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| KQ255_RS10945 (KQ255_10890) | xcpV | 2238630..2239010 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| KQ255_RS10950 (KQ255_10895) | xcpW | 2239010..2239711 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| KQ255_RS10955 (KQ255_10900) | gspK | 2239711..2240670 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| KQ255_RS10960 (KQ255_10905) | - | 2240900..2241496 (+) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| KQ255_RS10965 (KQ255_10910) | ung | 2241547..2242260 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| KQ255_RS10970 (KQ255_10915) | - | 2242257..2243381 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| KQ255_RS10975 (KQ255_10920) | tadA | 2243388..2243891 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=505230 KQ255_RS10945 WP_000836914.1 2238630..2239010(+) (xcpV) [Acinetobacter baumannii strain UC22850]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=505230 KQ255_RS10945 WP_000836914.1 2238630..2239010(+) (xcpV) [Acinetobacter baumannii strain UC22850]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |