Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   IXY24_RS11565 Genome accession   NZ_CP064845
Coordinates   2385898..2386494 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain BZR 277     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2380898..2391494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IXY24_RS11540 (IXY24_11415) mobB 2381274..2381795 (-) 522 WP_003154581.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  IXY24_RS11545 (IXY24_11420) glp 2381756..2383048 (-) 1293 WP_025851480.1 gephyrin-like molybdotransferase Glp -
  IXY24_RS11550 (IXY24_11425) - 2383066..2384085 (-) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  IXY24_RS11555 (IXY24_11430) - 2384137..2384739 (-) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  IXY24_RS11560 (IXY24_11435) - 2384885..2385877 (+) 993 WP_003154589.1 hypothetical protein -
  IXY24_RS11565 (IXY24_11440) rok 2385898..2386494 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  IXY24_RS11570 (IXY24_11445) - 2386946..2387404 (-) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  IXY24_RS11575 (IXY24_11450) - 2387692..2388498 (+) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  IXY24_RS11580 (IXY24_11455) - 2388532..2388777 (-) 246 WP_003154596.1 YkuS family protein -
  IXY24_RS11585 (IXY24_11460) - 2388838..2389962 (-) 1125 WP_069473384.1 N-acetyldiaminopimelate deacetylase -
  IXY24_RS11590 (IXY24_11465) dapD 2390033..2390743 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  IXY24_RS11595 (IXY24_11470) - 2390825..2391280 (-) 456 WP_024085239.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=505210 IXY24_RS11565 WP_003154591.1 2385898..2386494(-) (rok) [Bacillus velezensis strain BZR 277]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=505210 IXY24_RS11565 WP_003154591.1 2385898..2386494(-) (rok) [Bacillus velezensis strain BZR 277]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843