Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SII_RS03755 Genome accession   NC_022237
Coordinates   744547..745017 (+) Length   156 a.a.
NCBI ID   WP_020998594.1    Uniprot ID   -
Organism   Streptococcus intermedius C270     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 739547..750017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SII_RS03740 (SII_0734) - 741701..742411 (+) 711 WP_020998592.1 DUF805 domain-containing protein -
  SII_RS03745 (SII_0735) - 742852..743838 (+) 987 WP_020998593.1 Gfo/Idh/MocA family protein -
  SII_RS03750 (SII_0736) - 743867..744520 (+) 654 WP_009568677.1 uracil-DNA glycosylase -
  SII_RS03755 (SII_0737) mutX 744547..745017 (+) 471 WP_020998594.1 NUDIX hydrolase Machinery gene
  SII_RS03760 (SII_0738) - 745029..746303 (+) 1275 WP_020998595.1 dihydroorotase -
  SII_RS03765 (SII_0739) metK 746574..747764 (+) 1191 WP_020998596.1 methionine adenosyltransferase -
  SII_RS03770 (SII_0740) - 748102..749361 (+) 1260 WP_020998597.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SII_RS03775 (SII_0741) - 749440..749991 (+) 552 WP_020998598.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18175.63 Da        Isoelectric Point: 4.5298

>NTDB_id=50498 SII_RS03755 WP_020998594.1 744547..745017(+) (mutX) [Streptococcus intermedius C270]
MVKLATICYVDNGKEFLMLHRNKKPNDVHAGKWIGVGGKLENGETPQECAVREIFEETGLRVKKPILKGIITFPEFTPNH
DWYTYVFKVTEFEGELIDCDEGTLEWVPYEQVLSRPTWEGDLTFISWILEERPFFSAKFSYKGETLVESHVDFYED

Nucleotide


Download         Length: 471 bp        

>NTDB_id=50498 SII_RS03755 WP_020998594.1 744547..745017(+) (mutX) [Streptococcus intermedius C270]
ATGGTTAAATTAGCAACGATTTGCTATGTGGACAATGGAAAAGAATTTCTGATGTTACATCGAAATAAAAAGCCCAATGA
TGTCCATGCTGGCAAGTGGATTGGTGTTGGTGGAAAATTAGAAAATGGCGAAACACCACAGGAGTGTGCTGTCCGAGAAA
TCTTTGAAGAGACGGGATTGCGCGTGAAAAAGCCGATATTAAAAGGTATTATCACTTTTCCAGAGTTTACACCGAACCAT
GACTGGTACACTTATGTATTTAAAGTGACAGAGTTTGAGGGAGAACTGATTGACTGCGATGAAGGTACTTTAGAATGGGT
ACCTTATGAACAAGTTCTATCTAGACCAACTTGGGAGGGAGATCTTACTTTTATATCTTGGATTTTAGAAGAAAGACCGT
TTTTCTCGGCCAAATTTTCTTACAAAGGAGAGACGTTAGTGGAGAGCCATGTTGATTTTTATGAAGATTAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

78.065

99.359

0.776

Multiple sequence alignment