Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ITP52_RS22200 Genome accession   NZ_CP064818
Coordinates   1732497..1732637 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain SH1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1727497..1737637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ITP52_RS22195 - 1731379..1732551 (-) 1173 Protein_1687 condensation domain-containing protein -
  ITP52_RS22200 comS 1732497..1732637 (-) 141 WP_010886404.1 competence protein ComS Regulator
  ITP52_RS22205 srfAB 1732681..1735773 (-) 3093 Protein_1689 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=504943 ITP52_RS22200 WP_010886404.1 1732497..1732637(-) (comS) [Bacillus subtilis strain SH1]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=504943 ITP52_RS22200 WP_010886404.1 1732497..1732637(-) (comS) [Bacillus subtilis strain SH1]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1