Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KQ254_RS08260 Genome accession   NZ_CP076807
Coordinates   1740173..1741114 (+) Length   313 a.a.
NCBI ID   WP_001210792.1    Uniprot ID   A0A077GHT6
Organism   Acinetobacter baumannii strain UC20804     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1735173..1746114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ254_RS08250 (KQ254_08220) basA 1735594..1737441 (+) 1848 WP_017725502.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  KQ254_RS08255 (KQ254_08225) basB 1737512..1739542 (-) 2031 WP_100244476.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  KQ254_RS19765 - 1740042..1740173 (+) 132 WP_001218004.1 hypothetical protein -
  KQ254_RS08260 (KQ254_08230) ceuB 1740173..1741114 (+) 942 WP_001210792.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  KQ254_RS08265 (KQ254_08235) bauC 1741114..1742061 (+) 948 WP_001223290.1 ferric acinetobactin ABC transporter permease subunit BauC -
  KQ254_RS08270 (KQ254_08240) bauE 1742058..1742828 (+) 771 WP_017725500.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  KQ254_RS08275 (KQ254_08245) bauB 1742835..1743803 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33993.06 Da        Isoelectric Point: 8.6941

>NTDB_id=504922 KQ254_RS08260 WP_001210792.1 1740173..1741114(+) (ceuB) [Acinetobacter baumannii strain UC20804]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=504922 KQ254_RS08260 WP_001210792.1 1740173..1741114(+) (ceuB) [Acinetobacter baumannii strain UC20804]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTCA
CCGGTATTGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCTTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTATGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTTCTGACTTATCTTTTCGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTTA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACTGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAGAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGAGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077GHT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422