Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | ITP52_RS13040 | Genome accession | NZ_CP064818 |
| Coordinates | 2597033..2597374 (+) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis strain SH1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2592033..2602374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP52_RS13025 (ITP52_13025) | - | 2595224..2595862 (+) | 639 | WP_041850435.1 | class A sortase | - |
| ITP52_RS13030 (ITP52_13030) | ywpF | 2595988..2596398 (-) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| ITP52_RS13035 (ITP52_13035) | ywpG | 2596573..2596956 (+) | 384 | WP_003227796.1 | DynA interaction protein YwpG | - |
| ITP52_RS13040 (ITP52_13040) | ssbB | 2597033..2597374 (+) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| ITP52_RS13045 (ITP52_13045) | glcR | 2597599..2598375 (+) | 777 | WP_021480781.1 | transcriptional regulator GlcR | - |
| ITP52_RS13050 (ITP52_13050) | ywpJ | 2598381..2599238 (+) | 858 | WP_041850436.1 | phosphatase YwpJ | - |
| ITP52_RS13055 (ITP52_13055) | hepAB | 2599364..2602132 (-) | 2769 | WP_041850437.1 | DEAD/DEAH box helicase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=504908 ITP52_RS13040 WP_014478203.1 2597033..2597374(+) (ssbB) [Bacillus subtilis strain SH1]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=504908 ITP52_RS13040 WP_014478203.1 2597033..2597374(+) (ssbB) [Bacillus subtilis strain SH1]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |