Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   KQ254_RS01435 Genome accession   NZ_CP076807
Coordinates   308250..308885 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain UC20804     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 303250..313885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ254_RS01415 (KQ254_01405) - 303329..304144 (+) 816 WP_000011163.1 DsbC family protein -
  KQ254_RS01420 (KQ254_01410) - 304389..305690 (+) 1302 WP_039254228.1 homoserine dehydrogenase -
  KQ254_RS01425 (KQ254_01415) thrC 305746..306885 (+) 1140 WP_000063596.1 threonine synthase -
  KQ254_RS01430 (KQ254_01420) pbpG 306991..308037 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KQ254_RS01435 (KQ254_01425) letA 308250..308885 (+) 636 WP_000633799.1 response regulator Regulator
  KQ254_RS01440 (KQ254_01430) pilS 308896..310464 (+) 1569 WP_202977410.1 PAS domain-containing sensor histidine kinase Regulator
  KQ254_RS01445 (KQ254_01435) - 310488..311909 (+) 1422 WP_135013338.1 sigma-54 dependent transcriptional regulator -
  KQ254_RS01450 (KQ254_01440) - 311913..313097 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=504888 KQ254_RS01435 WP_000633799.1 308250..308885(+) (letA) [Acinetobacter baumannii strain UC20804]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=504888 KQ254_RS01435 WP_000633799.1 308250..308885(+) (letA) [Acinetobacter baumannii strain UC20804]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTGCTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55