Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IZG20_RS12740 Genome accession   NZ_CP064794
Coordinates   2786178..2786579 (-) Length   133 a.a.
NCBI ID   WP_024711139.1    Uniprot ID   A0A855JH23
Organism   Xanthomonas oryzae pv. oryzicola strain HGA4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2781178..2791579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IZG20_RS12725 - 2783192..2785228 (-) 2037 WP_014504131.1 methyl-accepting chemotaxis protein -
  IZG20_RS12730 - 2785268..2785798 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  IZG20_RS12735 - 2785798..2786160 (-) 363 WP_014504132.1 response regulator -
  IZG20_RS12740 pilG 2786178..2786579 (-) 402 WP_024711139.1 twitching motility response regulator PilG Regulator
  IZG20_RS12745 gshB 2786817..2787767 (+) 951 WP_014504134.1 glutathione synthase -
  IZG20_RS12750 - 2787764..2788639 (+) 876 WP_014504135.1 energy transducer TonB -
  IZG20_RS12755 - 2788930..2789880 (-) 951 WP_237384849.1 ADP-ribosylglycohydrolase family protein -
  IZG20_RS12760 tsaB 2789843..2790562 (-) 720 WP_048483532.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14681.06 Da        Isoelectric Point: 6.9539

>NTDB_id=504834 IZG20_RS12740 WP_024711139.1 2786178..2786579(-) (pilG) [Xanthomonas oryzae pv. oryzicola strain HGA4]
MTENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=504834 IZG20_RS12740 WP_024711139.1 2786178..2786579(-) (pilG) [Xanthomonas oryzae pv. oryzicola strain HGA4]
ATGACTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGTTGTCGTCCAAGGATGGGCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A855JH23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684