Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IMX31_RS22475 Genome accession   NZ_CP064793
Coordinates   4341522..4341716 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain IGA-FME-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4336522..4346716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMX31_RS22450 - 4336688..4337710 (-) 1023 WP_195781196.1 ABC transporter ATP-binding protein -
  IMX31_RS22455 - 4337937..4338710 (-) 774 WP_060746425.1 DUF2268 domain-containing protein -
  IMX31_RS22460 fabF 4338817..4340058 (-) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  IMX31_RS22465 - 4340098..4341036 (-) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  IMX31_RS22470 - 4341293..4341493 (+) 201 WP_045291919.1 hypothetical protein -
  IMX31_RS22475 comZ 4341522..4341716 (-) 195 WP_013081746.1 ComZ family protein Regulator
  IMX31_RS22480 - 4341794..4342678 (-) 885 WP_195781197.1 NAD-dependent epimerase/dehydratase family protein -
  IMX31_RS22485 - 4342861..4343601 (-) 741 WP_013055401.1 hypothetical protein -
  IMX31_RS22490 - 4343811..4343999 (+) 189 WP_013055400.1 YjzD family protein -
  IMX31_RS22495 - 4344203..4345087 (+) 885 WP_195781198.1 NAD(P)-dependent oxidoreductase -
  IMX31_RS22500 galT 4345130..4346653 (-) 1524 WP_195781199.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=504813 IMX31_RS22475 WP_013081746.1 4341522..4341716(-) (comZ) [Priestia megaterium strain IGA-FME-1]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=504813 IMX31_RS22475 WP_013081746.1 4341522..4341716(-) (comZ) [Priestia megaterium strain IGA-FME-1]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGCTATCAATGGAGCACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCCGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563