Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IMX31_RS09570 Genome accession   NZ_CP064793
Coordinates   1787497..1788447 (+) Length   316 a.a.
NCBI ID   WP_116071119.1    Uniprot ID   A0A3D8X6B7
Organism   Priestia megaterium strain IGA-FME-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1782497..1793447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMX31_RS09535 - 1783038..1783391 (+) 354 WP_195782645.1 DUF4440 domain-containing protein -
  IMX31_RS09540 lepB 1783478..1784038 (+) 561 WP_028414470.1 signal peptidase I -
  IMX31_RS09545 - 1784328..1784891 (+) 564 WP_195782646.1 NAD(P)H-dependent oxidoreductase -
  IMX31_RS09550 - 1785217..1785381 (+) 165 WP_164795753.1 hypothetical protein -
  IMX31_RS09555 - 1785463..1785717 (-) 255 WP_013057893.1 hypothetical protein -
  IMX31_RS09560 - 1786080..1786886 (+) 807 WP_195782647.1 cell wall hydrolase -
  IMX31_RS09565 - 1787109..1787282 (+) 174 WP_229754668.1 hypothetical protein -
  IMX31_RS09570 ceuB 1787497..1788447 (+) 951 WP_116071119.1 ABC transporter permease Machinery gene
  IMX31_RS09575 - 1788440..1789387 (+) 948 WP_195782648.1 iron chelate uptake ABC transporter family permease subunit -
  IMX31_RS09580 - 1789381..1790139 (+) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  IMX31_RS09585 - 1790163..1791119 (+) 957 WP_195782649.1 siderophore ABC transporter substrate-binding protein -
  IMX31_RS27015 - 1791247..1791369 (+) 123 WP_268241093.1 hypothetical protein -
  IMX31_RS09590 - 1791718..1792560 (+) 843 WP_195782650.1 manganese catalase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34977.21 Da        Isoelectric Point: 9.9188

>NTDB_id=504796 IMX31_RS09570 WP_116071119.1 1787497..1788447(+) (ceuB) [Priestia megaterium strain IGA-FME-1]
MKFYQLILVFAVLAVSSLFIGVQDLSAVDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRIIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=504796 IMX31_RS09570 WP_116071119.1 1787497..1788447(+) (ceuB) [Priestia megaterium strain IGA-FME-1]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCAGTTTCATCTCTTTTTATAGGAGTACAAGATTTGTCAGC
AGTAGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTCAGTCGGTTTCCAAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGCATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACGACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTATTAATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
CCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATATAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTTCCTTTTTTAGGATTGATTATTCCAAATATCGTATCAATTTACCGTGGAGATCATTTACGAAAAAGTCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGTGATATTTTAGGAAGAATCATTATTTTTCCTTATGAAATTTCCATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3D8X6B7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53

94.937

0.503