Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | IMX31_RS03440 | Genome accession | NZ_CP064793 |
| Coordinates | 647609..648661 (+) | Length | 350 a.a. |
| NCBI ID | WP_116073650.1 | Uniprot ID | - |
| Organism | Priestia megaterium strain IGA-FME-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 642609..653661
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMX31_RS03405 | - | 643175..643381 (+) | 207 | WP_013059184.1 | YqgQ family protein | - |
| IMX31_RS03410 | - | 643384..644352 (+) | 969 | WP_195781858.1 | ROK family glucokinase | - |
| IMX31_RS03415 | - | 644464..645366 (+) | 903 | WP_195781859.1 | M14 family metallocarboxypeptidase | - |
| IMX31_RS03420 | - | 645402..645578 (-) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| IMX31_RS03425 | - | 645787..646419 (+) | 633 | WP_116073652.1 | MBL fold metallo-hydrolase | - |
| IMX31_RS03430 | - | 646457..646693 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| IMX31_RS03435 | - | 646955..647338 (+) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| IMX31_RS03440 | comGA | 647609..648661 (+) | 1053 | WP_116073650.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IMX31_RS03445 | comGB | 648652..649698 (+) | 1047 | WP_195781860.1 | competence type IV pilus assembly protein ComGB | - |
| IMX31_RS03450 | comGC | 649713..650024 (+) | 312 | WP_016765560.1 | competence type IV pilus major pilin ComGC | - |
| IMX31_RS03455 | comGD | 649966..650448 (+) | 483 | WP_229754523.1 | competence type IV pilus minor pilin ComGD | - |
| IMX31_RS03460 | - | 650432..650770 (+) | 339 | WP_195781861.1 | type II secretion system protein | - |
| IMX31_RS03465 | comGF | 650767..651204 (+) | 438 | WP_195781862.1 | competence type IV pilus minor pilin ComGF | - |
| IMX31_RS03470 | comGG | 651194..651568 (+) | 375 | WP_195781863.1 | competence type IV pilus minor pilin ComGG | - |
| IMX31_RS03475 | - | 651612..651797 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| IMX31_RS03480 | - | 651822..652646 (-) | 825 | WP_195781864.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39610.99 Da Isoelectric Point: 9.0586
>NTDB_id=504785 IMX31_RS03440 WP_116073650.1 647609..648661(+) (comGA) [Priestia megaterium strain IGA-FME-1]
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=504785 IMX31_RS03440 WP_116073650.1 647609..648661(+) (comGA) [Priestia megaterium strain IGA-FME-1]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCTAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCTAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |