Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Azoinq_RS05885 Genome accession   NZ_CP064782
Coordinates   1301533..1301895 (-) Length   120 a.a.
NCBI ID   WP_216132173.1    Uniprot ID   A0A975XW33
Organism   Azospira inquinata strain Azo-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1296533..1306895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Azoinq_RS05870 (Azoinq_05865) - 1298356..1300551 (-) 2196 WP_216131102.1 methyl-accepting chemotaxis protein -
  Azoinq_RS05875 (Azoinq_05870) - 1300607..1301122 (-) 516 WP_216131099.1 chemotaxis protein CheW -
  Azoinq_RS05880 (Azoinq_05875) - 1301141..1301503 (-) 363 WP_269751311.1 response regulator transcription factor -
  Azoinq_RS05885 (Azoinq_05880) pilG 1301533..1301895 (-) 363 WP_216132173.1 PleD family two-component system response regulator Regulator
  Azoinq_RS05890 (Azoinq_05885) thiD 1302289..1303131 (+) 843 WP_216131096.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  Azoinq_RS05895 (Azoinq_05890) thiE 1303124..1303804 (+) 681 WP_216131093.1 thiamine phosphate synthase -
  Azoinq_RS05900 (Azoinq_05895) hemL 1303791..1305071 (+) 1281 WP_216131090.1 glutamate-1-semialdehyde 2,1-aminomutase -
  Azoinq_RS05905 (Azoinq_05900) nifV 1305310..1306449 (+) 1140 WP_216131087.1 homocitrate synthase -
  Azoinq_RS05910 (Azoinq_05905) nifW 1306463..1306795 (+) 333 WP_216131084.1 nitrogenase stabilizing/protective protein NifW -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13359.41 Da        Isoelectric Point: 6.4479

>NTDB_id=504723 Azoinq_RS05885 WP_216132173.1 1301533..1301895(-) (pilG) [Azospira inquinata strain Azo-3]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALSKIADHQPDIVFCDIMMPRLDGYQTCALIKKNPRFRSTPVVMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLLAVAEHGQPQVQ

Nucleotide


Download         Length: 363 bp        

>NTDB_id=504723 Azoinq_RS05885 WP_216132173.1 1301533..1301895(-) (pilG) [Azospira inquinata strain Azo-3]
ATGGTGATTGACGACAGCAATACCATCCGTCGCAGCGCGGAGATTTTCCTCGTTCAGGCAGGGTGCCAGGTGGTGCTGGC
AGAAGACGGATTCGATGCCCTGTCCAAGATTGCCGATCATCAGCCCGATATCGTCTTCTGCGACATCATGATGCCCCGTC
TGGATGGCTATCAGACCTGTGCCCTGATCAAGAAAAATCCCCGTTTTCGCTCCACTCCGGTGGTCATGCTGTCCTCCAAA
GACGGCCTGTTTGACCGTGCCCGGGGGCGGATGGTCGGTTCCGACCAATACCTCACCAAACCCTTTACCAAAGACAGCCT
GCTCCTGGCCGTGGCGGAACACGGTCAGCCCCAGGTGCAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.298

95

0.658