Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IWH25_RS02465 Genome accession   NZ_CP064781
Coordinates   516983..517345 (-) Length   120 a.a.
NCBI ID   WP_203389126.1    Uniprot ID   A0A974SSC5
Organism   Azospira restricta strain DSM 18626     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 511983..522345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IWH25_RS02450 (IWH25_02450) - 513826..515991 (-) 2166 WP_203387781.1 methyl-accepting chemotaxis protein -
  IWH25_RS02455 (IWH25_02455) - 516054..516569 (-) 516 WP_203387782.1 chemotaxis protein CheW -
  IWH25_RS02460 (IWH25_02460) - 516583..516945 (-) 363 WP_275403831.1 response regulator transcription factor -
  IWH25_RS02465 (IWH25_02465) pilG 516983..517345 (-) 363 WP_203389126.1 response regulator Regulator
  IWH25_RS02470 (IWH25_02470) - 517475..517627 (-) 153 WP_203389127.1 rubredoxin -
  IWH25_RS02475 (IWH25_02475) thiD 517747..518586 (+) 840 WP_203387783.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  IWH25_RS02480 (IWH25_02480) thiE 518839..519477 (+) 639 WP_203387784.1 thiamine phosphate synthase -
  IWH25_RS02485 (IWH25_02485) hemL 519474..520754 (+) 1281 WP_203387785.1 glutamate-1-semialdehyde 2,1-aminomutase -
  IWH25_RS02490 (IWH25_02490) sugE 520751..521089 (+) 339 WP_203387786.1 quaternary ammonium compound efflux SMR transporter SugE -
  IWH25_RS02495 (IWH25_02495) corA 521090..522052 (-) 963 WP_203387787.1 magnesium/cobalt transporter CorA -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13299.40 Da        Isoelectric Point: 6.9230

>NTDB_id=504691 IWH25_RS02465 WP_203389126.1 516983..517345(-) (pilG) [Azospira restricta strain DSM 18626]
MVIDDSNTIRRSAEIFLVQAGCQVLLAEDGFDALAKIADHQPDIIFCDIMMPRLDGYQTCALIKKNARFRATPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQAVASFAPQSVQ

Nucleotide


Download         Length: 363 bp        

>NTDB_id=504691 IWH25_RS02465 WP_203389126.1 516983..517345(-) (pilG) [Azospira restricta strain DSM 18626]
ATGGTGATCGACGACAGCAACACCATCCGGCGCAGCGCCGAGATCTTTCTGGTGCAAGCCGGTTGCCAGGTGCTGCTCGC
CGAGGACGGCTTCGATGCGCTGGCGAAGATCGCCGACCATCAGCCGGACATCATCTTCTGCGACATCATGATGCCGCGCC
TCGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACGCCCGTTTCCGCGCCACGCCGGTGATCATGCTCTCCTCCAAG
GACGGCCTGTTCGACCGCGCCCGCGGCCGCATGGTCGGCTCCGACCAGTACCTCACCAAGCCGTTTACCAAGGACAGCCT
GCTGCAGGCGGTTGCGAGCTTCGCGCCGCAGTCGGTTCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.369

92.5

0.642