Detailed information NTG0050440

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPB14_RS07305
• Genome accession: NC_017733
• Coordinates: 1515753..1517192 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748994.1
• Uniprot ID: -
• Organism: Helicobacter pylori HUP-B14
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1510753..1522192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPB14_RS07280 (HPB14_07325)	recG	1511890..1513761 (-)	1872	WP_014658551.1	ATP-dependent DNA helicase RecG	-
HPB14_RS07285 (HPB14_07330)	-	1513838..1514185 (+)	348	WP_000837056.1	hypothetical protein	-
HPB14_RS07290 (HPB14_07335)	-	1514189..1514824 (+)	636	WP_000668036.1	outer membrane protein	-
HPB14_RS07295 (HPB14_07340)	-	1514821..1515573 (-)	753	WP_000767559.1	exodeoxyribonuclease III	-
HPB14_RS07305 (HPB14_07345)	comH	1515753..1517192 (-)	1440	WP_000748994.1	hypothetical protein	Machinery gene
HPB14_RS07315 (HPB14_07350)	dnaA	1517413..1518780 (-)	1368	WP_000380596.1	chromosomal replication initiator protein DnaA	-
HPB14_RS07320 (HPB14_07355)	-	1518934..1519476 (+)	543	WP_014658552.1	purine-nucleoside phosphorylase	-
HPB14_RS07325 (HPB14_07360)	-	1519519..1519758 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPB14_RS07330 (HPB14_07365)	glmS	1519759..1521552 (+)	1794	WP_000334443.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54883.87 Da
• Isoelectric Point: 6.5119

>NTDB_id=50440 HPB14_RS07305 WP_000748994.1 1515753..1517192(-) (comH) [Helicobacter pylori HUP-B14]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNMPMQKPQNKPSSSQQPSQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPTNEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADIDENNESNENKDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=50440 HPB14_RS07305 WP_000748994.1 1515753..1517192(-) (comH) [Helicobacter pylori HUP-B14]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCCAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACATGCCCATGCAAAAACCACAAAACAAGCCTAGTTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTGCAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTG
ATGAAAATAATGAAAGCAATGAGAATAAGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGATGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCCAGAGCAAGAAAAGACGGCACGACTAGGCAATGTTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAATATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
GTATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.962