Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KP952_RS06170 Genome accession   NZ_CP076731
Coordinates   1199502..1199693 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain Miz-8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1194502..1204693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KP952_RS06145 (KP952_06145) yjzC 1196410..1196589 (+) 180 WP_003245356.1 YjzC family protein -
  KP952_RS06150 (KP952_06150) yjzD 1196636..1196821 (-) 186 WP_003245236.1 YjzD family protein -
  KP952_RS06155 (KP952_06155) - 1197070..1197804 (+) 735 WP_014479433.1 hypothetical protein -
  KP952_RS06160 (KP952_06160) - 1197886..1198443 (+) 558 WP_014479435.1 hypothetical protein -
  KP952_RS06165 (KP952_06165) med 1198534..1199487 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  KP952_RS06170 (KP952_06170) comZ 1199502..1199693 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  KP952_RS06175 (KP952_06175) yjzB 1199723..1199959 (-) 237 WP_015383342.1 spore coat protein YjzB -
  KP952_RS06180 (KP952_06180) fabH 1200124..1201062 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KP952_RS06185 (KP952_06185) fabF 1201085..1202326 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KP952_RS06190 (KP952_06190) yjaZ 1202402..1203187 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  KP952_RS06195 (KP952_06195) appD 1203378..1204364 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=504394 KP952_RS06170 WP_046380930.1 1199502..1199693(+) (comZ) [Bacillus subtilis subsp. subtilis strain Miz-8]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=504394 KP952_RS06170 WP_046380930.1 1199502..1199693(+) (comZ) [Bacillus subtilis subsp. subtilis strain Miz-8]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterProScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968