Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | SCRE_RS08345 | Genome accession | NC_022236 |
| Coordinates | 1686267..1687538 (+) | Length | 423 a.a. |
| NCBI ID | WP_006268554.1 | Uniprot ID | F9P7T9 |
| Organism | Streptococcus constellatus subsp. pharyngis C232 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1681267..1692538
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCRE_RS10495 | - | 1682709..1682855 (-) | 147 | WP_006268140.1 | hypothetical protein | - |
| SCRE_RS08320 (SCRE_1634) | - | 1683022..1683762 (-) | 741 | WP_020998051.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| SCRE_RS08325 (SCRE_1635) | prmA | 1683763..1684716 (-) | 954 | WP_006267983.1 | 50S ribosomal protein L11 methyltransferase | - |
| SCRE_RS08330 (SCRE_1636) | - | 1684732..1685202 (-) | 471 | WP_006268202.1 | GNAT family N-acetyltransferase | - |
| SCRE_RS08335 (SCRE_1637) | - | 1685199..1685645 (-) | 447 | WP_006268439.1 | NUDIX hydrolase | - |
| SCRE_RS08340 (SCRE_1638) | - | 1685695..1686165 (-) | 471 | WP_003037612.1 | DUF3013 family protein | - |
| SCRE_RS08345 (SCRE_1639) | rarA | 1686267..1687538 (+) | 1272 | WP_006268554.1 | replication-associated recombination protein A | Machinery gene |
| SCRE_RS10125 (SCRE_1641) | - | 1688105..1688618 (+) | 514 | Protein_1658 | DUF308 domain-containing protein | - |
| SCRE_RS08360 (SCRE_1642) | - | 1688689..1689338 (-) | 650 | Protein_1659 | HD domain-containing protein | - |
| SCRE_RS08365 (SCRE_1643) | - | 1689405..1690043 (-) | 639 | WP_003070721.1 | deoxynucleoside kinase | - |
| SCRE_RS08370 (SCRE_1644) | - | 1690230..1690997 (-) | 768 | WP_006268505.1 | epoxyqueuosine reductase QueH | - |
Sequence
Protein
Download Length: 423 a.a. Molecular weight: 46829.33 Da Isoelectric Point: 6.5107
>NTDB_id=50439 SCRE_RS08345 WP_006268554.1 1686267..1687538(+) (rarA) [Streptococcus constellatus subsp. pharyngis C232]
MPDNLAIRMRPKNINQVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLTNDDIKQAIQ
TALTDTERGFDFPVQLDDDALDFIATSTNGDLRSAFNSLDLAVLSTQADHAGVRHITLDIMENSLQKSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTALEAAQKIGFPEARILIANIV
IDLALSPKSNSAYVAIDKALSDLRQNGNLAIPRHLRDGHYVGSKELGNAQDYKYPHNYPGNWVKQDYLPEKIKYADYFIP
NENGKYERALGMTKNKIDQLKNN
MPDNLAIRMRPKNINQVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLTNDDIKQAIQ
TALTDTERGFDFPVQLDDDALDFIATSTNGDLRSAFNSLDLAVLSTQADHAGVRHITLDIMENSLQKSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTALEAAQKIGFPEARILIANIV
IDLALSPKSNSAYVAIDKALSDLRQNGNLAIPRHLRDGHYVGSKELGNAQDYKYPHNYPGNWVKQDYLPEKIKYADYFIP
NENGKYERALGMTKNKIDQLKNN
Nucleotide
Download Length: 1272 bp
>NTDB_id=50439 SCRE_RS08345 WP_006268554.1 1686267..1687538(+) (rarA) [Streptococcus constellatus subsp. pharyngis C232]
ATGCCAGACAATTTAGCGATTCGCATGCGGCCTAAAAATATCAATCAGGTCATCGGTCAGAAACATCTGGTCGGTGAAGG
AAAAATCATTCGTCGCATGGTGGAAGCCAATCGCCTGTCTTCCATGATTCTCTATGGTCCGCCAGGGATTGGCAAGACTT
CAATTGCTTCGGCTATTGCCGGAACTACCAAATTTGCTTTTCGGACCTTTAATGCTACTGTTGATAGTAAGAAGCGTCTG
CAAGAGATTGCGGAAGAAGCCAAATTCTCTGGTGGTTTGGTGCTGCTGTTAGACGAGATTCATCGCTTGGACAAGACCAA
ACAGGACTTCCTCCTACCGCTCTTGGAAAACGGTCTGGTCATCATGATTGGCGCCACAACAGAAAATCCCTTTTTCTCCG
TCACTCCCGCTATTCGCAGCCGAGTACAAATTTTCGAGTTGGAACCTCTGACAAATGATGATATTAAACAAGCCATTCAA
ACAGCCCTGACGGATACCGAACGAGGTTTTGATTTTCCTGTCCAGCTAGATGATGACGCTCTGGATTTCATTGCCACTTC
CACGAATGGAGATCTGCGCTCAGCCTTTAATTCTCTAGATTTAGCAGTTCTCTCTACCCAAGCGGATCATGCAGGTGTTC
GCCATATCACTCTGGATATTATGGAAAACAGCCTGCAAAAGAGCTACATCACTATGGACAAAGACGGAGACGGTCACTAT
GACGTCCTGTCCGCTTTACAGAAGTCTATTCGCGGGTCTGATGTCAATGCCAGTCTCCATTATGCAGCTCGCTTGATTGA
AGCTGGAGACCTTCCCAGTCTCGCACGACGCCTGACAGTCATTGCTTATGAAGACATTGGTTTGGCAAATCCCGATGCTC
AGATTCATACAGTGACCGCACTTGAAGCCGCTCAAAAAATTGGGTTCCCAGAAGCTCGCATCCTCATTGCCAACATTGTC
ATTGACCTAGCACTTTCTCCTAAGTCCAACTCGGCCTACGTAGCCATAGACAAAGCACTCTCTGACTTGCGCCAGAACGG
AAATCTCGCTATCCCCCGTCATCTACGAGACGGTCATTACGTCGGAAGCAAGGAGCTGGGAAATGCGCAGGATTACAAAT
ATCCACATAACTATCCTGGTAACTGGGTGAAACAAGATTATCTTCCTGAAAAAATAAAATATGCCGATTATTTCATTCCA
AATGAAAATGGAAAGTATGAACGAGCCCTTGGCATGACTAAAAATAAGATTGATCAATTAAAAAACAACTAA
ATGCCAGACAATTTAGCGATTCGCATGCGGCCTAAAAATATCAATCAGGTCATCGGTCAGAAACATCTGGTCGGTGAAGG
AAAAATCATTCGTCGCATGGTGGAAGCCAATCGCCTGTCTTCCATGATTCTCTATGGTCCGCCAGGGATTGGCAAGACTT
CAATTGCTTCGGCTATTGCCGGAACTACCAAATTTGCTTTTCGGACCTTTAATGCTACTGTTGATAGTAAGAAGCGTCTG
CAAGAGATTGCGGAAGAAGCCAAATTCTCTGGTGGTTTGGTGCTGCTGTTAGACGAGATTCATCGCTTGGACAAGACCAA
ACAGGACTTCCTCCTACCGCTCTTGGAAAACGGTCTGGTCATCATGATTGGCGCCACAACAGAAAATCCCTTTTTCTCCG
TCACTCCCGCTATTCGCAGCCGAGTACAAATTTTCGAGTTGGAACCTCTGACAAATGATGATATTAAACAAGCCATTCAA
ACAGCCCTGACGGATACCGAACGAGGTTTTGATTTTCCTGTCCAGCTAGATGATGACGCTCTGGATTTCATTGCCACTTC
CACGAATGGAGATCTGCGCTCAGCCTTTAATTCTCTAGATTTAGCAGTTCTCTCTACCCAAGCGGATCATGCAGGTGTTC
GCCATATCACTCTGGATATTATGGAAAACAGCCTGCAAAAGAGCTACATCACTATGGACAAAGACGGAGACGGTCACTAT
GACGTCCTGTCCGCTTTACAGAAGTCTATTCGCGGGTCTGATGTCAATGCCAGTCTCCATTATGCAGCTCGCTTGATTGA
AGCTGGAGACCTTCCCAGTCTCGCACGACGCCTGACAGTCATTGCTTATGAAGACATTGGTTTGGCAAATCCCGATGCTC
AGATTCATACAGTGACCGCACTTGAAGCCGCTCAAAAAATTGGGTTCCCAGAAGCTCGCATCCTCATTGCCAACATTGTC
ATTGACCTAGCACTTTCTCCTAAGTCCAACTCGGCCTACGTAGCCATAGACAAAGCACTCTCTGACTTGCGCCAGAACGG
AAATCTCGCTATCCCCCGTCATCTACGAGACGGTCATTACGTCGGAAGCAAGGAGCTGGGAAATGCGCAGGATTACAAAT
ATCCACATAACTATCCTGGTAACTGGGTGAAACAAGATTATCTTCCTGAAAAAATAAAATATGCCGATTATTTCATTCCA
AATGAAAATGGAAAGTATGAACGAGCCCTTGGCATGACTAAAAATAAGATTGATCAATTAAAAAACAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
59.809 |
98.818 |
0.591 |