Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   KP952_RS00220 Genome accession   NZ_CP076731
Coordinates   41517..42344 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain Miz-8     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36517..47344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KP952_RS00195 (KP952_00195) efpO 37580..39022 (+) 1443 WP_021479734.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  KP952_RS00200 (KP952_00200) tmk 39019..39657 (+) 639 WP_069322312.1 dTMP kinase -
  KP952_RS00205 (KP952_00205) darA 39731..40060 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  KP952_RS00210 (KP952_00210) yaaR 40073..40513 (+) 441 WP_009966249.1 YaaR family protein -
  KP952_RS00215 (KP952_00215) holB 40525..41514 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  KP952_RS00220 (KP952_00220) yaaT 41517..42344 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  KP952_RS00225 (KP952_00225) yabA 42359..42718 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  KP952_RS00230 (KP952_00230) trmNF 42777..43520 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  KP952_RS00235 (KP952_00235) yazA 43507..43806 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  KP952_RS00240 (KP952_00240) rsmI 43781..44659 (+) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  KP952_RS00245 (KP952_00245) abrB 44708..44998 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=504357 KP952_RS00220 WP_003226767.1 41517..42344(+) (yaaT) [Bacillus subtilis subsp. subtilis strain Miz-8]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=504357 KP952_RS00220 WP_003226767.1 41517..42344(+) (yaaT) [Bacillus subtilis subsp. subtilis strain Miz-8]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996