Detailed information NTG0504347

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KQ220_RS21490
• Genome accession: NZ_CP076709
• Coordinates: 4469236..4470261 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O158:H23 strain CFIAFB20140388
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4464236..4475261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ220_RS21460 (KQ220_21455)	zapB	4464320..4464565 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KQ220_RS21465 (KQ220_21460)	rraA	4464650..4465135 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KQ220_RS21470 (KQ220_21465)	menA	4465228..4466154 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KQ220_RS21475 (KQ220_21470)	hslU	4466221..4467552 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KQ220_RS21480 (KQ220_21475)	hslV	4467562..4468092 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KQ220_RS21485 (KQ220_21480)	ftsN	4468185..4469144 (-)	960	WP_000068834.1	cell division protein FtsN	-
KQ220_RS21490 (KQ220_21485)	cytR	4469236..4470261 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KQ220_RS21495 (KQ220_21490)	priA	4470417..4472615 (-)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
KQ220_RS21500 (KQ220_21495)	rpmE	4472818..4473030 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KQ220_RS21505 (KQ220_21500)	yiiX	4473091..4473699 (-)	609	WP_033870645.1	YiiX family permuted papain-like enzyme	-
KQ220_RS21510 (KQ220_21505)	metJ	4473759..4474076 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=504347 KQ220_RS21490 WP_000644904.1 4469236..4470261(-) (cytR) [Escherichia coli O158:H23 strain CFIAFB20140388]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=504347 KQ220_RS21490 WP_000644904.1 4469236..4470261(-) (cytR) [Escherichia coli O158:H23 strain CFIAFB20140388]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGTTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGAGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628