Detailed information NTG0504334

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KQ220_RS19350
• Genome accession: NZ_CP076709
• Coordinates: 4006343..4007326 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196484.1
• Uniprot ID: -
• Organism: Escherichia coli O158:H23 strain CFIAFB20140388
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4001343..4012326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ220_RS19325 (KQ220_19325)	bcsF	4001504..4001695 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
KQ220_RS19330 (KQ220_19330)	bcsG	4001692..4003371 (+)	1680	WP_000191589.1	cellulose biosynthesis protein BcsG	-
KQ220_RS19335 (KQ220_19335)	ldrD	4003458..4003565 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KQ220_RS19340 (KQ220_19340)	yhjV	4004041..4005312 (+)	1272	WP_085459987.1	aromatic amino acid transport family protein	-
KQ220_RS19345 (KQ220_19345)	dppF	4005342..4006346 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KQ220_RS19350 (KQ220_19350)	amiE	4006343..4007326 (-)	984	WP_001196484.1	dipeptide ABC transporter ATP-binding protein	Regulator
KQ220_RS19355 (KQ220_19355)	dppC	4007337..4008239 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KQ220_RS19360 (KQ220_19360)	dppB	4008249..4009268 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KQ220_RS19365 (KQ220_19365)	dppA	4009419..4011026 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35816.35 Da
• Isoelectric Point: 6.5813

>NTDB_id=504334 KQ220_RS19350 WP_001196484.1 4006343..4007326(-) (amiE) [Escherichia coli O158:H23 strain CFIAFB20140388]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=504334 KQ220_RS19350 WP_001196484.1 4006343..4007326(-) (amiE) [Escherichia coli O158:H23 strain CFIAFB20140388]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGTGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGCGAATCCGGTTCCGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAACTGGAGTTCAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGTCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCTTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACTCGCCGTCAGCGGGCGATTGATT
TGCTGAATCAGGTTGGCATTCCCGATCCTGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGTCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGCGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404