Detailed information NTG0504296

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KQ220_RS07975
• Genome accession: NZ_CP076709
• Coordinates: 1682045..1683031 (-)
• Length: 328 a.a.
• NCBI ID: WP_112006044.1
• Uniprot ID: -
• Organism: Escherichia coli O158:H23 strain CFIAFB20140388
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1677045..1688031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ220_RS07950 (KQ220_07950)	maeA	1677986..1679683 (-)	1698	WP_000433464.1	malate dehydrogenase	-
KQ220_RS07955 (KQ220_07955)	sra	1679840..1679977 (-)	138	WP_000841554.1	stationary-phase-induced ribosome-associated protein	-
KQ220_RS07960 (KQ220_07960)	bdm	1680079..1680294 (-)	216	WP_000495766.1	biofilm-dependent modulation protein	-
KQ220_RS07965 (KQ220_07965)	osmC	1680639..1681070 (+)	432	WP_000152305.1	peroxiredoxin OsmC	-
KQ220_RS07970 (KQ220_07970)	ddpF	1681126..1682052 (-)	927	WP_112006046.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	-
KQ220_RS07975 (KQ220_07975)	amiE	1682045..1683031 (-)	987	WP_112006044.1	ABC transporter ATP-binding protein	Regulator
KQ220_RS07980 (KQ220_07980)	ddpC	1683028..1683924 (-)	897	WP_000979620.1	D,D-dipeptide ABC transporter permease	-
KQ220_RS07985 (KQ220_07985)	ddpB	1683921..1684943 (-)	1023	WP_000145091.1	ABC transporter permease	-
KQ220_RS07990 (KQ220_07990)	ddpA	1684945..1686495 (-)	1551	WP_216781447.1	ABC transporter substrate-binding protein	-
KQ220_RS07995 (KQ220_07995)	ddpX	1686509..1687090 (-)	582	WP_001285824.1	D-alanyl-D-alanine dipeptidase	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36069.84 Da
• Isoelectric Point: 7.4523

>NTDB_id=504296 KQ220_RS07975 WP_112006044.1 1682045..1683031(-) (amiE) [Escherichia coli O158:H23 strain CFIAFB20140388]
MTQPVLDIQQLYLSFPGFNGDVHALNNVSLKINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGHISLLGEDALN
AREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPISRREARAKAIALLEEMQIPDAVEVMSRYPFELSGG
MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGV
TADVIHHPRHPYTIGLLQCAPEHGIPRQPLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNHRCACWY
PQQEVISV

Nucleotide

• Length: 987 bp

>NTDB_id=504296 KQ220_RS07975 WP_112006044.1 1682045..1683031(-) (amiE) [Escherichia coli O158:H23 strain CFIAFB20140388]
ATGACCCAACCCGTTCTGGACATTCAACAGCTGTATTTGAGTTTCCCCGGTTTTAACGGCGACGTTCACGCGCTCAACAA
TGTGTCATTGAAAATCAACCGCGGTGAAATTGTCGGTCTGGTGGGAGAATCCGGCTCGGGTAAATCAGTCACTGCAATGT
TGATTATGCGTCTGTTACCGACGGGCAGTTATTGCGTACATCGGGGACATATTTCACTGCTGGGAGAAGATGCTCTTAAC
GCTCGGGAAAAGCAGCTTCGTCAGTGGCGCGGCGCACGAGTGGCGATGATCTTTCAGGAACCGATGACCGCCCTTAATCC
GACACGTCGAATAGGTCTTCAGATGATGGACGTGATCCGCCATCATCAACCAATAAGTCGTCGGGAAGCCAGAGCTAAAG
CGATTGCCCTGCTGGAAGAGATGCAAATCCCGGATGCCGTGGAAGTTATGTCGCGCTATCCGTTTGAGCTTTCAGGTGGT
ATGCGCCAGCGGGTAATGATTGCGCTGGCATTCTCCTGCGAGCCGCAGTTGATTATTGCCGACGAACCGACTACGGCGCT
GGACGTCACGGTACAGTTGCAGGTACTGCGTCTGCTTAAACATAAAGCCCGCGCCAGTGGAACTGCGGTACTGTTCATCA
GCCATGATATGGCCGTGGTGTCGCAACTGTGCGATAGCGTTTACGTGATGTATGCCGGAAGCGTGATTGAAAGCGGCGTG
ACGGCAGACGTTATCCATCATCCCCGGCATCCGTATACCATTGGTTTGCTGCAATGCGCACCGGAACATGGAATACCGCG
CCAGCCATTACCCGCTATTCCGGGGACGGTACCAAACCTCACCCATTTGCCTGACGGCTGCGCTTTTCGCGATCGTTGCT
ATGCGGCAGGTGCACAGTGTGAAAACGTCCCGGCGCTGACAGCGTGTGGTGACAACAACCACCGCTGCGCCTGTTGGTAT
CCTCAGCAGGAGGTCATTAGTGTCTGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (236-300)

• ABC transporter (ABC_tran) (25-184)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	40.125	97.256	0.39
amiE	Streptococcus thermophilus LMG 18311	40.125	97.256	0.39
amiE	Streptococcus thermophilus LMD-9	40.125	97.256	0.39
oppD	Streptococcus mutans UA159	39.623	96.951	0.384