Detailed information NTG0504116

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KQ221_RS00890
• Genome accession: NZ_CP076704
• Coordinates: 189245..190228 (+)
• Length: 327 a.a.
• NCBI ID: WP_097446433.1
• Uniprot ID: -
• Organism: Escherichia coli O8:H28 strain BMH-17-0027
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 184245..195228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ221_RS00875 (KQ221_00875)	dppA	185545..187152 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KQ221_RS00880 (KQ221_00880)	dppB	187303..188322 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KQ221_RS00885 (KQ221_00885)	dppC	188332..189234 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KQ221_RS00890 (KQ221_00890)	amiE	189245..190228 (+)	984	WP_097446433.1	dipeptide ABC transporter ATP-binding protein	Regulator
KQ221_RS00895 (KQ221_00895)	dppF	190225..191229 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KQ221_RS00900 (KQ221_00900)	yhjV	191259..192530 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KQ221_RS00905 (KQ221_00905)	-	193006..193113 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KQ221_RS00910 (KQ221_00910)	-	193489..193596 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KQ221_RS00915 (KQ221_00915)	-	193972..194079 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KQ221_RS00920 (KQ221_00920)	-	194455..194562 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35815.36 Da
• Isoelectric Point: 6.5811

>NTDB_id=504116 KQ221_RS00890 WP_097446433.1 189245..190228(+) (amiE) [Escherichia coli O8:H28 strain BMH-17-0027]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRDLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=504116 KQ221_RS00890 WP_097446433.1 189245..190228(+) (amiE) [Escherichia coli O8:H28 strain BMH-17-0027]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCGACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401