Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KRG72_RS05440 Genome accession   NZ_CP076703
Coordinates   1082822..1084561 (-) Length   579 a.a.
NCBI ID   WP_258250166.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1077822..1089561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS05410 (KRG72_05415) - 1077902..1078399 (+) 498 WP_258250161.1 DUF308 domain-containing protein -
  KRG72_RS05415 (KRG72_05420) queF 1078436..1078927 (-) 492 WP_039696752.1 preQ(1) synthase -
  KRG72_RS05420 (KRG72_05425) queE 1079076..1079789 (-) 714 WP_258250162.1 7-carboxy-7-deazaguanine synthase QueE -
  KRG72_RS05425 (KRG72_05430) queD 1079782..1080228 (-) 447 WP_258250163.1 6-carboxytetrahydropterin synthase QueD -
  KRG72_RS05430 (KRG72_05435) queC 1080228..1080878 (-) 651 WP_258250164.1 7-cyano-7-deazaguanine synthase QueC -
  KRG72_RS05435 (KRG72_05440) rcrQ 1081050..1082819 (-) 1770 WP_258250165.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05440 (KRG72_05445) rcrP 1082822..1084561 (-) 1740 WP_258250166.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05445 (KRG72_05450) - 1084609..1086477 (-) 1869 WP_258250167.1 ABC-F family ATP-binding cassette domain-containing protein -
  KRG72_RS05450 (KRG72_05455) - 1086474..1087679 (-) 1206 WP_258250168.1 CCA tRNA nucleotidyltransferase -
  KRG72_RS05455 (KRG72_05460) dapB 1087676..1088443 (-) 768 WP_074626670.1 4-hydroxy-tetrahydrodipicolinate reductase -
  KRG72_RS05460 (KRG72_05465) - 1088467..1089315 (-) 849 WP_074867865.1 DegV family protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65039.51 Da        Isoelectric Point: 6.1215

>NTDB_id=504072 KRG72_RS05440 WP_258250166.1 1082822..1084561(-) (rcrP) [Streptococcus equinus strain S1]
MKLIWTYLKRYPKWLVLDVIGALTFVVVNLGLPTALARMIDQGVTVGNKEKVYFWAIAMLVVIVLGTIGRVVLAYAAGKI
TTNMIKDMRNDMYDKLQQYSHQEYEQIGVSSLVTRMTSDAFILMQFAEQTLRMGVITPLMMISSVVMILVTSPSLAWIVA
IAIPFLVLVVYYVATRTRPLSENQQATLDKINQYVRENLTGLRVIRAFAREDFQEERFGRKNDEYKDLSSRLFILTGLTE
PLFVLIIISMIVAIVWFALNPLSHGDLQIGNLVAFIEYSFHALFSFLLFANFFTMYPRMVVSSERISEVMAMPISIDPNE
DGVTETATKGYLEFNNVTFAYPGETESPVLKDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIEENLKYGKTDATKEELQEAADIAQAKEFIESRDDRYQTHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAQLRARLKAVTQEATVLIVAQRVGTIMDADQIIVLDKGEIVGRGTHEELMQSND
IYREIANSQLNKAKEMKGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=504072 KRG72_RS05440 WP_258250166.1 1082822..1084561(-) (rcrP) [Streptococcus equinus strain S1]
ATGAAACTAATTTGGACTTATTTGAAAAGATATCCCAAATGGCTAGTACTCGATGTTATTGGGGCATTGACTTTCGTTGT
GGTAAACCTGGGTCTGCCGACGGCTCTTGCTCGAATGATTGACCAGGGGGTTACAGTAGGAAATAAGGAAAAAGTATATT
TCTGGGCAATTGCTATGCTTGTTGTCATTGTTTTAGGGACAATCGGTCGTGTTGTACTTGCCTATGCAGCTGGGAAAATT
ACGACGAACATGATTAAGGACATGCGTAACGATATGTATGATAAGTTACAGCAATATTCACATCAAGAATATGAACAAAT
TGGTGTGTCTTCCTTAGTCACTCGTATGACAAGTGATGCCTTTATTTTGATGCAATTTGCTGAGCAAACACTGCGAATGG
GTGTCATTACGCCTTTGATGATGATATCTAGTGTGGTTATGATTTTGGTGACAAGCCCATCCCTTGCTTGGATTGTAGCT
ATTGCTATTCCATTTTTGGTCTTGGTTGTCTATTATGTGGCGACACGAACTCGTCCATTATCTGAAAATCAACAAGCTAC
TCTTGATAAAATCAACCAGTACGTTCGTGAGAATCTGACTGGCTTACGTGTTATTCGTGCCTTTGCTAGAGAAGATTTCC
AAGAAGAACGTTTTGGTCGTAAAAATGATGAGTACAAGGATTTGTCAAGTCGCTTGTTTATCTTAACTGGTTTGACAGAG
CCTTTATTCGTTCTAATCATTATTTCAATGATTGTAGCTATTGTTTGGTTTGCTTTGAATCCACTTTCTCATGGGGATTT
GCAAATTGGTAATTTGGTAGCTTTTATTGAATATAGCTTCCACGCACTCTTTTCATTCTTATTGTTTGCTAATTTCTTTA
CCATGTATCCACGTATGGTGGTTTCAAGTGAACGTATTTCAGAAGTGATGGCAATGCCAATTTCAATTGATCCAAATGAA
GATGGTGTGACTGAAACAGCTACAAAAGGCTATTTGGAATTTAATAATGTTACTTTTGCTTATCCTGGTGAAACTGAAAG
TCCTGTTTTAAAAGATATTTCCTTTAAGGCTAAACCTGGTGAAACCATTGCCTTCATCGGTTCAACTGGATCTGGTAAGT
CATCACTCGTAAACTTAATTCCACGTTTTTATGACGTAACACTGGGTAAAATTTTGGTTGATGGTGTTGATGTTCGAGAT
TATCAACTAAAAGCTCTTCGTCAAAAAATTGGTTTCATTCCTCAAAAAGCTTTGCTATTTACTGGAACAATCGAAGAAAA
TTTGAAATACGGTAAGACAGATGCTACTAAGGAAGAGTTGCAAGAAGCAGCAGATATTGCTCAGGCCAAGGAATTTATCG
AAAGTCGTGATGACCGCTATCAAACACATTTGGCTGAAGGCGGAAGTAATTTGTCTGGTGGGCAAAAGCAACGTTTGTCA
ATTGCGCGTGCAGTGGTTAAGAAACCAGACATCTATATCTTTGATGATTCATTCTCAGCACTCGATTATAAGACAGATGC
TCAATTACGTGCACGCTTGAAAGCAGTGACACAAGAAGCAACGGTATTGATTGTGGCTCAACGTGTTGGGACGATTATGG
ATGCTGATCAGATTATTGTGCTTGATAAAGGTGAAATCGTTGGACGCGGAACGCATGAGGAATTGATGCAATCAAACGAT
ATCTATCGTGAAATTGCTAATTCGCAATTGAACAAAGCCAAAGAGATGAAAGGAGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(27-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.698

91.364

0.363