Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   KRG72_RS02285 Genome accession   NZ_CP076703
Coordinates   430997..431605 (-) Length   202 a.a.
NCBI ID   WP_014334359.1    Uniprot ID   A0A091BWK9
Organism   Streptococcus equinus strain S1     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 425997..436605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS02270 (KRG72_02270) nadE 426318..427142 (+) 825 WP_074561295.1 ammonia-dependent NAD(+) synthetase -
  KRG72_RS02275 (KRG72_02275) pepC 427371..428708 (+) 1338 WP_258255689.1 aminopeptidase C -
  KRG72_RS02280 (KRG72_02280) pbp1a 428794..431010 (-) 2217 WP_093816002.1 penicillin-binding protein PBP1A -
  KRG72_RS02285 (KRG72_02285) recU 430997..431605 (-) 609 WP_014334359.1 Holliday junction resolvase RecU Machinery gene
  KRG72_RS02290 (KRG72_02290) - 431680..432198 (+) 519 WP_074869957.1 DUF1273 domain-containing protein -
  KRG72_RS02295 (KRG72_02295) gpsB 432326..432655 (+) 330 WP_006531162.1 cell division regulator GpsB -
  KRG72_RS02305 (KRG72_02305) - 433277..434449 (+) 1173 WP_039695898.1 class I SAM-dependent RNA methyltransferase -
  KRG72_RS02310 (KRG72_02310) - 434513..436021 (+) 1509 WP_258255694.1 cell division site-positioning protein MapZ family protein -

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 23261.70 Da        Isoelectric Point: 9.9080

>NTDB_id=504032 KRG72_RS02285 WP_014334359.1 430997..431605(-) (recU) [Streptococcus equinus strain S1]
MVNYPHHLIRKQAAPASRKNTKSTINFANRGMSFEAAINETNNYYLSRDIAVVHKKPTPIQIVKVDYPKRSRAKIVEAYF
RQASTTDYSGVYKGRYIDFEAKETRQKTSMPLKNFHAHQIEHMEHVLKQDGICFVLLHFSTLKETYFLPASALVDFYQIN
LGTKSMPLDYIRKNGYMVTTSSLPQVPYLDIIDQKILGGDHN

Nucleotide


Download         Length: 609 bp        

>NTDB_id=504032 KRG72_RS02285 WP_014334359.1 430997..431605(-) (recU) [Streptococcus equinus strain S1]
ATGGTTAATTACCCTCATCATCTTATTCGAAAACAAGCAGCCCCAGCTTCTAGGAAGAACACAAAATCAACGATTAACTT
TGCTAATCGTGGGATGAGTTTTGAAGCAGCAATCAATGAAACTAATAATTACTACTTATCTCGTGATATCGCTGTCGTTC
ACAAAAAACCAACCCCAATTCAAATTGTAAAAGTTGATTATCCTAAAAGAAGCCGTGCCAAAATTGTAGAAGCTTACTTT
CGCCAAGCATCCACGACCGATTATTCTGGTGTCTACAAAGGACGCTACATTGACTTTGAAGCGAAAGAAACGCGGCAAAA
GACTTCCATGCCCTTAAAAAACTTCCACGCTCACCAGATTGAGCACATGGAACACGTCTTAAAGCAAGACGGCATCTGCT
TTGTACTACTTCACTTTTCGACACTTAAGGAAACTTATTTCTTACCTGCTAGTGCTCTAGTAGACTTTTACCAAATCAAC
CTCGGCACCAAATCCATGCCACTTGATTATATCAGAAAAAATGGGTATATGGTGACAACAAGTTCACTCCCTCAAGTTCC
TTATTTGGACATTATCGATCAAAAAATATTAGGCGGTGATCACAATTAA

Domains

Predicted by InterProScan.

Recombination protein U (RecU)

(30-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A091BWK9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

50.761

97.525

0.495