Detailed information NTG0503905

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KQ261_RS21810
• Genome accession: NZ_CP076693
• Coordinates: 4450758..4451783 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S103EC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4445758..4456783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ261_RS21780 (KQ261_21780)	zapB	4445842..4446087 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KQ261_RS21785 (KQ261_21785)	rraA	4446172..4446657 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KQ261_RS21790 (KQ261_21790)	menA	4446750..4447676 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KQ261_RS21795 (KQ261_21795)	hslU	4447743..4449074 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KQ261_RS21800 (KQ261_21800)	hslV	4449084..4449614 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KQ261_RS21805 (KQ261_21805)	ftsN	4449707..4450666 (-)	960	WP_000068834.1	cell division protein FtsN	-
KQ261_RS21810 (KQ261_21810)	cytR	4450758..4451783 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KQ261_RS21815 (KQ261_21815)	priA	4451939..4454137 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
KQ261_RS21820 (KQ261_21820)	rpmE	4454340..4454552 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KQ261_RS21825 (KQ261_21825)	yiiX	4454613..4455221 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
KQ261_RS21830 (KQ261_21830)	metJ	4455281..4455598 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=503905 KQ261_RS21810 WP_000644908.1 4450758..4451783(-) (cytR) [Escherichia coli strain S103EC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=503905 KQ261_RS21810 WP_000644908.1 4450758..4451783(-) (cytR) [Escherichia coli strain S103EC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625