Detailed information NTG0503731

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KQ258_RS21960
• Genome accession: NZ_CP076687
• Coordinates: 4477610..4478635 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain S22EC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4472610..4483635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ258_RS21930 (KQ258_21925)	zapB	4472694..4472939 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KQ258_RS21935 (KQ258_21930)	rraA	4473024..4473509 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KQ258_RS21940 (KQ258_21935)	menA	4473602..4474528 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KQ258_RS21945 (KQ258_21940)	hslU	4474595..4475926 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
KQ258_RS21950 (KQ258_21945)	hslV	4475936..4476466 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KQ258_RS21955 (KQ258_21950)	ftsN	4476559..4477518 (-)	960	WP_000068834.1	cell division protein FtsN	-
KQ258_RS21960 (KQ258_21955)	cytR	4477610..4478635 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
KQ258_RS21965 (KQ258_21960)	priA	4478791..4480989 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
KQ258_RS21970 (KQ258_21965)	rpmE	4481192..4481404 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KQ258_RS21975 (KQ258_21970)	yiiX	4481465..4482073 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
KQ258_RS21980 (KQ258_21975)	metJ	4482133..4482450 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=503731 KQ258_RS21960 WP_000644908.1 4477610..4478635(-) (cytR) [Escherichia coli strain S22EC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=503731 KQ258_RS21960 WP_000644908.1 4477610..4478635(-) (cytR) [Escherichia coli strain S22EC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625