Detailed information NTG0503624

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: KPF23_RS03290
• Genome accession: NZ_CP076675
• Coordinates: 678272..681037 (+)
• Length: 921 a.a.
• NCBI ID: WP_014938992.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain XG19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 673272..686037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPF23_RS03270 (KPF23_03270)	tsaE	674181..674588 (-)	408	WP_014938995.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
KPF23_RS03275 (KPF23_03275)	-	675106..675759 (+)	654	WP_014938993.1	hypothetical protein	-
KPF23_RS03280 (KPF23_03280)	-	675881..676714 (+)	834	WP_004917755.1	phosphatase PAP2 family protein	-
KPF23_RS03285 (KPF23_03285)	eptA	676701..678224 (+)	1524	WP_004917757.1	phosphoethanolamine--lipid A transferase EptA	-
KPF23_RS03290 (KPF23_03290)	uvrA	678272..681037 (+)	2766	WP_014938992.1	excinuclease ABC subunit UvrA	Machinery gene
KPF23_RS03295 (KPF23_03295)	-	681277..683034 (-)	1758	WP_014938991.1	AAA family ATPase	-
KPF23_RS03300 (KPF23_03300)	-	683027..683320 (-)	294	WP_014938990.1	DUF6804 family protein	-
KPF23_RS03305 (KPF23_03305)	-	683327..685858 (-)	2532	WP_014938989.1	Hsp70 family protein	-

Sequence

Protein

• Length: 921 a.a.
• Molecular weight: 103414.56 Da
• Isoelectric Point: 6.2627

>NTDB_id=503624 KPF23_RS03290 WP_014938992.1 678272..681037(+) (uvrA) [Riemerella anatipestifer strain XG19]
MNIKNNIFVKNAHLNNLKNIDVLIPKNKLVVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGRLEKPKIDDIK
GLAPSIAIQQKVISSNPRSTVGTSTEIYDYLKLLFARVGRTYSPVSGDEVKKDSISDVISYIEENPNQEFLLTAPLSFAD
GDFKSLLNTLKVSGFTRLEINGNIAEIEDLESFGFVPEKEMSLNLVIDRFVYEDDEYFLQRLADSIQTAFYEGHGSCALK
NIETQKIKHFSNLFEADGISFLEPNLHFFSFNNPYGACPTCEGYGKVVGIDEDLVIPNKRLSVYEDAVACWKGETMSEWK
MHFIKNAPDFPIHKPYFELTKEQKQLLWRGTGAKNFPCIDQFFRMLEENLYKIQYRVMLSRYRGKTKCPDCEGLRLRKET
EWVKVGGHNIQSLMELPLDELLPLIKNLKLTKHEQEIAKRLLYEITTRLEFLLKVGLGYLTLNRTSNTLSGGESQRINLA
TSLGSSLVGSIYILDEPSIGLHSQDTENLIEVLKNLRDLGNTVIVVEHDEDIMRAADYIIDIGPEAGFLGGELVFAGDFK
DLKEADTLTSKYLTGRLEIAVPKRRRKAKSFINIKGARQNNLKNIDVDIPLENLVVVTGVSGSGKSTLMKEVLANDIQIQ
LGMGGKKADYDYVEFPPQLVKHIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQRHSKTMNLKPKHFSFNVDGGRCDE
CKGEGVITISMQFMADVELECEHCKGARFKSEILEVKFDEKNIADILQMTVDEAIDFFNDNKQDKIVTKLKPLQEVGLGY
LKLGQSSSTLSGGEAQRVKLASFLVKGVTTEKTLFIFDEPSTGLHFHDIQKLLTSLQALIELGHSVVVIEHQPDIIKSAD
WIIDIGPNAGKYGGEVVFAGTPEDLAKYKKSKTAKFVAEKL

Nucleotide

• Length: 2766 bp

>NTDB_id=503624 KPF23_RS03290 WP_014938992.1 678272..681037(+) (uvrA) [Riemerella anatipestifer strain XG19]
ATGAATATTAAAAATAATATTTTTGTTAAAAACGCACATCTTAACAACCTTAAAAACATAGATGTTCTCATACCTAAAAA
CAAACTAGTGGTAGTAACTGGCGTGTCTGGTAGTGGGAAATCGTCTTTAGCCTTTGATACTATTTATGCCGAAGGGCAGA
GGCGTTATGTGGAGAGTTTAAGCTCTTATGCTAGGCAGTTTTTGGGACGATTGGAAAAGCCAAAGATAGACGATATTAAA
GGTTTAGCACCATCTATCGCCATACAACAGAAAGTAATTTCTTCTAATCCAAGGTCCACAGTAGGAACTTCCACCGAAAT
TTACGATTATCTTAAATTATTGTTTGCTCGTGTGGGGCGTACCTATTCACCTGTGTCTGGTGATGAGGTGAAAAAGGACA
GCATTTCTGATGTCATTTCTTATATAGAAGAAAATCCTAATCAAGAGTTTCTACTCACAGCACCGCTTTCTTTTGCTGAT
GGTGATTTTAAATCATTGTTAAATACATTGAAAGTTTCAGGATTTACTAGATTGGAAATTAACGGAAATATCGCTGAAAT
AGAAGATTTAGAGAGTTTCGGCTTCGTTCCTGAAAAAGAGATGTCGCTTAATTTGGTTATTGACCGCTTTGTTTACGAGG
ACGATGAGTATTTTCTGCAACGCTTAGCAGATTCTATCCAAACAGCTTTTTACGAAGGGCACGGCTCTTGTGCTTTAAAA
AATATTGAAACACAAAAAATAAAACATTTTTCTAACCTTTTTGAAGCTGATGGTATTTCTTTTTTAGAACCAAATCTTCA
TTTTTTCAGTTTTAATAATCCTTACGGAGCGTGTCCTACTTGTGAGGGTTATGGTAAAGTGGTTGGGATAGATGAAGACT
TAGTAATTCCTAATAAAAGGCTTTCGGTTTACGAAGATGCCGTCGCTTGTTGGAAAGGAGAAACGATGAGCGAGTGGAAA
ATGCATTTTATCAAAAACGCTCCAGATTTTCCAATCCATAAACCCTATTTTGAACTTACTAAAGAGCAAAAACAACTCTT
ATGGAGAGGAACAGGAGCTAAAAATTTCCCTTGTATAGACCAGTTTTTCCGTATGCTGGAGGAGAATTTGTATAAGATAC
AATACCGAGTGATGCTTTCTCGTTACAGGGGTAAAACCAAATGTCCCGACTGCGAAGGTCTAAGATTAAGAAAAGAAACC
GAATGGGTAAAAGTGGGAGGGCATAATATACAATCGTTAATGGAATTACCATTGGACGAACTTCTGCCTTTAATTAAGAA
CCTTAAACTTACCAAACACGAGCAAGAAATTGCTAAAAGGCTACTCTACGAAATTACTACTAGACTAGAGTTTTTGTTAA
AAGTAGGCTTGGGATATTTAACGCTAAACCGTACTTCTAATACTTTGTCAGGTGGAGAAAGTCAAAGAATTAACTTAGCG
ACGAGCTTAGGGAGTTCTTTGGTAGGGTCTATCTATATTTTGGACGAGCCTTCTATTGGGCTACATTCACAGGACACCGA
GAATTTAATAGAGGTTCTAAAAAATTTGAGAGATTTAGGCAATACCGTTATTGTTGTGGAACACGATGAGGATATTATGC
GTGCCGCAGATTATATTATAGATATAGGTCCAGAAGCAGGTTTCCTTGGGGGAGAGTTGGTCTTCGCAGGCGATTTTAAA
GACCTCAAAGAAGCCGATACTTTAACCTCTAAATACCTTACAGGAAGGTTAGAAATAGCAGTGCCAAAAAGGAGAAGGAA
AGCTAAATCGTTCATCAATATCAAAGGAGCTAGGCAAAATAACCTTAAAAATATAGATGTTGATATTCCTTTGGAGAATT
TGGTGGTGGTTACAGGAGTGTCGGGTTCTGGTAAATCTACATTGATGAAAGAGGTTTTGGCTAATGATATTCAAATCCAG
TTAGGAATGGGAGGCAAAAAAGCCGACTATGATTATGTGGAATTTCCACCTCAATTGGTGAAGCATATAGAATTGATAGA
CCAAAATCCTATCGGAAAATCGTCTAGGTCTAACCCTGTAACTTATCTTAAGGCTTATGATGATATTAGGGATTTGTTCG
CTAAGCAGCGTCATTCTAAAACTATGAATTTAAAACCTAAGCATTTTTCGTTTAATGTAGATGGTGGGAGATGTGATGAG
TGTAAAGGAGAGGGCGTTATTACCATATCTATGCAATTTATGGCAGATGTGGAACTAGAATGTGAGCATTGTAAAGGAGC
AAGATTTAAGTCCGAGATATTGGAAGTTAAATTTGATGAGAAAAACATTGCAGATATTCTCCAAATGACGGTAGATGAAG
CGATTGATTTCTTTAATGATAATAAGCAAGATAAAATAGTTACCAAACTAAAACCATTGCAAGAAGTTGGTCTAGGCTAT
CTTAAATTGGGACAAAGTTCTTCTACGCTTTCGGGTGGAGAAGCCCAAAGGGTAAAGTTGGCTTCGTTTTTAGTAAAAGG
TGTAACTACGGAGAAAACGCTTTTTATTTTTGATGAACCTTCCACAGGGCTTCATTTTCACGATATACAGAAATTATTAA
CCTCATTACAGGCTCTTATAGAGTTGGGGCATTCTGTAGTAGTTATAGAGCATCAGCCAGATATTATTAAGTCAGCAGAC
TGGATAATAGATATAGGTCCTAATGCAGGTAAATATGGTGGAGAAGTAGTTTTTGCGGGAACGCCTGAAGATTTAGCAAA
ATATAAAAAATCTAAGACTGCTAAATTCGTAGCCGAAAAACTTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (135-240)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-356)

• ABC transporter (ABC_tran) (602-841)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	44.167	100	0.46
uvrA	Streptococcus pneumoniae TIGR4	44.167	100	0.46
uvrA	Streptococcus pneumoniae D39	44.167	100	0.46