Detailed information NTG0503357

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KP725_RS23220
• Genome accession: NZ_CP076645
• Coordinates: 4775945..4776970 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MSI001
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4770945..4781970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KP725_RS23200 (KP725_23200)	metJ	4772006..4772323 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KP725_RS23205 (KP725_23205)	yiiX	4772507..4773115 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KP725_RS23210 (KP725_23210)	rpmE	4773176..4773388 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KP725_RS23215 (KP725_23215)	priA	4773591..4775789 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KP725_RS23220 (KP725_23220)	cytR	4775945..4776970 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KP725_RS23225 (KP725_23225)	ftsN	4777062..4778021 (+)	960	WP_151160518.1	cell division protein FtsN	-
KP725_RS23230 (KP725_23230)	hslV	4778114..4778644 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KP725_RS23235 (KP725_23235)	hslU	4778654..4779985 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KP725_RS23240 (KP725_23240)	menA	4780052..4780978 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KP725_RS23245 (KP725_23245)	rraA	4781071..4781556 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KP725_RS23250 (KP725_23250)	zapB	4781641..4781886 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=503357 KP725_RS23220 WP_000644904.1 4775945..4776970(+) (cytR) [Escherichia coli strain MSI001]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=503357 KP725_RS23220 WP_000644904.1 4775945..4776970(+) (cytR) [Escherichia coli strain MSI001]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628