Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KPA27_RS05170 Genome accession   NZ_CP076517
Coordinates   1010914..1011582 (+) Length   222 a.a.
NCBI ID   WP_024413648.1    Uniprot ID   -
Organism   Streptococcus suis strain 39565     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1005914..1016582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPA27_RS05140 (KPA27_05140) - 1007008..1007148 (+) 141 WP_044683303.1 hypothetical protein -
  KPA27_RS05145 (KPA27_05145) - 1007161..1007532 (+) 372 WP_202847704.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  KPA27_RS05150 (KPA27_05150) - 1007560..1008312 (+) 753 WP_015646831.1 ATP-binding cassette domain-containing protein -
  KPA27_RS05155 (KPA27_05155) - 1008313..1010283 (+) 1971 WP_202847703.1 ABC transporter permease -
  KPA27_RS05160 (KPA27_05160) relB 1010374..1010625 (+) 252 WP_024385716.1 type II toxin-antitoxin system RelB family antitoxin -
  KPA27_RS05165 (KPA27_05165) - 1010609..1010875 (+) 267 WP_014637925.1 type II toxin-antitoxin system RelE/ParE family toxin -
  KPA27_RS05170 (KPA27_05170) braR 1010914..1011582 (+) 669 WP_024413648.1 response regulator transcription factor Regulator
  KPA27_RS05175 (KPA27_05175) - 1011579..1012520 (+) 942 WP_024413647.1 sensor histidine kinase -
  KPA27_RS05180 (KPA27_05180) - 1012701..1014209 (+) 1509 WP_202847702.1 phosphomannomutase/phosphoglucomutase -
  KPA27_RS05185 (KPA27_05185) xerS 1014272..1015342 (-) 1071 WP_044769194.1 tyrosine recombinase XerS Machinery gene
  KPA27_RS05190 (KPA27_05190) - 1015508..1016029 (-) 522 WP_024408901.1 AAA family ATPase -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25578.41 Da        Isoelectric Point: 4.7792

>NTDB_id=503159 KPA27_RS05170 WP_024413648.1 1010914..1011582(+) (braR) [Streptococcus suis strain 39565]
MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFI
SSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFTNESEQVQLSPTETKIL
SALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 669 bp        

>NTDB_id=503159 KPA27_RS05170 WP_024413648.1 1010914..1011582(+) (braR) [Streptococcus suis strain 39565]
ATGATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCACCTAGGCAAATC
GTATCAGGTGGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTGGCGGAAATTAAACCAGACTTAGTGCTGATGG
ATATTAGCCTGCCTTATTACAACGGCTTTTATTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATC
TCCTCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGTGATGATTTTGTTTCCAAGCCTTTTTCACT
AGGGATTTTGGATGCCAAAATCGGAGCCTTCCTGCGTCGGGTCAATCAATTCAGCAAATCAACTGATTTGTCAATTGACC
AGTTTCAACTTAGTTTAGACGGACGATTTACAAACGAATCGGAACAGGTTCAATTGTCTCCTACGGAAACCAAGATTTTG
TCCGCCTTACTAGAACGACAAGGGCAGATTGTTAGCAAGGAAGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTAT
CGACCAGAATACGCTCAATGTAAATATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACGG
TTCGTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.099

0.468