Detailed information NTG0502948

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: KPF73_RS05495
• Genome accession: NZ_CP076507
• Coordinates: 1070266..1071225 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain R16.0174
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1065266..1076225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KPF73_RS05470 (KPF73_05470)	neuC	1065833..1066948 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
KPF73_RS08850 (KPF73_05475)	-	1066945..1067859 (+)	915	Protein_1072	beta-1,4-N-acetylgalactosaminyltransferase	-
KPF73_RS08855 (KPF73_05480)	-	1067893..1068555 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
KPF73_RS05485 (KPF73_05485)	-	1068550..1069399 (-)	850	Protein_1074	glycosyltransferase	-
KPF73_RS05490 (KPF73_05490)	waaV	1069383..1070207 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
KPF73_RS05495 (KPF73_05495)	waaF	1070266..1071225 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
KPF73_RS05500 (KPF73_05500)	gmhA	1071206..1071766 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
KPF73_RS05505 (KPF73_05505)	rfaE1	1071763..1073148 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
KPF73_RS05510 (KPF73_05510)	rfaD	1073141..1074094 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
KPF73_RS05515 (KPF73_05515)	gmhB	1074095..1074655 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
KPF73_RS05520 (KPF73_05520)	-	1074737..1075039 (+)	303	WP_002852762.1	cytochrome c	-
KPF73_RS05525 (KPF73_05525)	ccoS	1075062..1075268 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=502948 KPF73_RS05495 WP_002875425.1 1070266..1071225(+) (waaF) [Campylobacter jejuni strain R16.0174]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=502948 KPF73_RS05495 WP_002875425.1 1070266..1071225(+) (waaF) [Campylobacter jejuni strain R16.0174]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1