Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   HWI43_RS01510 Genome accession   NZ_CP064528
Coordinates   352815..353711 (+) Length   298 a.a.
NCBI ID   WP_237618348.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain UMCG370     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 347815..358711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWI43_RS01490 (HWI43_01450) - 348503..350047 (+) 1545 WP_049382921.1 NAD(P)H-binding protein -
  HWI43_RS01495 (HWI43_01455) - 350171..351640 (-) 1470 WP_002490478.1 alkaline phosphatase -
  HWI43_RS01500 (HWI43_01460) - 351937..352113 (+) 177 WP_002496677.1 hypothetical protein -
  HWI43_RS01505 (HWI43_01465) braR 352144..352809 (+) 666 WP_002496678.1 response regulator transcription factor Regulator
  HWI43_RS01510 (HWI43_01470) braS 352815..353711 (+) 897 WP_237618348.1 HAMP domain-containing sensor histidine kinase Regulator
  HWI43_RS01515 (HWI43_01475) - 353822..354571 (+) 750 WP_002490451.1 ABC transporter ATP-binding protein -
  HWI43_RS01520 (HWI43_01480) - 354573..356585 (+) 2013 WP_002497378.1 ABC transporter permease -
  HWI43_RS01525 (HWI43_01485) - 356689..357279 (+) 591 WP_408020483.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34957.58 Da        Isoelectric Point: 6.7015

>NTDB_id=502737 HWI43_RS01510 WP_237618348.1 352815..353711(+) (braS) [Staphylococcus epidermidis strain UMCG370]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLNFKKNEHLKDKVAYLEYELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDTQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNQGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=502737 HWI43_RS01510 WP_237618348.1 352815..353711(+) (braS) [Staphylococcus epidermidis strain UMCG370]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTATTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATCATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAATTTTAAAAAGAACGAACATCTTAAAGATAAAGTGGCATATTTAGAATATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAATGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGCCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
CATTTTAACCGATACACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATATGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACAGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTAAATCAGGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60

98.993

0.594