Detailed information NTG0502728

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KN807_RS07855
• Genome accession: NZ_CP076470
• Coordinates: 1626990..1628015 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DH5a
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1621990..1633015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KN807_RS07835 (KN807_07805)	metJ	1623051..1623368 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KN807_RS07840 (KN807_07810)	yiiX	1623552..1624160 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KN807_RS07845 (KN807_07815)	rpmE	1624221..1624433 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KN807_RS07850 (KN807_07820)	priA	1624636..1626834 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KN807_RS07855 (KN807_07825)	cytR	1626990..1628015 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KN807_RS07860 (KN807_07830)	ftsN	1628107..1629066 (+)	960	WP_000068828.1	cell division protein FtsN	-
KN807_RS07865 (KN807_07835)	hslV	1629159..1629689 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KN807_RS07870 (KN807_07840)	hslU	1629699..1631030 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KN807_RS07875 (KN807_07845)	menA	1631097..1632023 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KN807_RS07880 (KN807_07850)	rraA	1632116..1632601 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KN807_RS07885 (KN807_07855)	zapB	1632686..1632931 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=502728 KN807_RS07855 WP_000644904.1 1626990..1628015(+) (cytR) [Escherichia coli strain DH5a]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=502728 KN807_RS07855 WP_000644904.1 1626990..1628015(+) (cytR) [Escherichia coli strain DH5a]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628