Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KMZ16_RS20785 Genome accession   NZ_CP076445
Coordinates   4025388..4026182 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain ps4100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4020388..4031182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KMZ16_RS20760 (KMZ16_20585) - 4021501..4022184 (-) 684 WP_038428106.1 response regulator transcription factor -
  KMZ16_RS20765 (KMZ16_20590) - 4022396..4023295 (+) 900 WP_003226945.1 PepSY domain-containing protein -
  KMZ16_RS20770 (KMZ16_20595) - 4023457..4023957 (+) 501 WP_003226943.1 PepSY domain-containing protein -
  KMZ16_RS20775 (KMZ16_20600) - 4023954..4024083 (-) 130 Protein_4045 hypothetical protein -
  KMZ16_RS20780 (KMZ16_20605) htrA 4024104..4025306 (-) 1203 WP_015250812.1 serine protease HtrC Regulator
  KMZ16_RS20785 (KMZ16_20610) vicX 4025388..4026182 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  KMZ16_RS20790 (KMZ16_20615) walI 4026204..4027046 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  KMZ16_RS20795 (KMZ16_20620) walH 4027033..4028400 (-) 1368 WP_029318541.1 WalRK two-component regulatory system regulator WalH -
  KMZ16_RS20800 (KMZ16_20625) walK 4028390..4030225 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  KMZ16_RS20805 (KMZ16_20630) walR 4030233..4030940 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=502575 KMZ16_RS20785 WP_003226939.1 4025388..4026182(-) (vicX) [Bacillus subtilis subsp. subtilis strain ps4100]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=502575 KMZ16_RS20785 WP_003226939.1 4025388..4026182(-) (vicX) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53