Detailed information NTG0502452

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KMZ16_RS03740
• Genome accession: NZ_CP076445
• Coordinates: 723788..724915 (-)
• Length: 375 a.a.
• NCBI ID: WP_080477800.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4100
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 718788..729915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ16_RS03725 (KMZ16_03700)	-	719416..721320 (+)	1905	WP_069703751.1	class I SAM-dependent DNA methyltransferase	-
KMZ16_RS03730 (KMZ16_03705)	-	721323..722354 (+)	1032	WP_069703752.1	restriction endonuclease subunit S	-
KMZ16_RS03735 (KMZ16_03710)	-	723601..723798 (-)	198	WP_003240078.1	hypothetical protein	-
KMZ16_RS03740 (KMZ16_03715)	rapC	723788..724915 (-)	1128	WP_080477800.1	Rap family tetratricopeptide repeat protein	Regulator
KMZ16_RS03745 (KMZ16_03720)	-	725104..725405 (-)	302	Protein_685	hypothetical protein	-
KMZ16_RS03750 (KMZ16_03725)	-	725427..725678 (-)	252	WP_069703754.1	bacteriocin immunity protein	-
KMZ16_RS03755 (KMZ16_03730)	-	725921..726391 (-)	471	WP_069703775.1	antitoxin YezG family protein	-
KMZ16_RS03760 (KMZ16_03735)	-	726452..726931 (-)	480	WP_069703755.1	antitoxin YezG family protein	-
KMZ16_RS03765 (KMZ16_03740)	yeeF	726936..728945 (-)	2010	WP_069703756.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44462.17 Da
• Isoelectric Point: 6.6870

>NTDB_id=502452 KMZ16_RS03740 WP_080477800.1 723788..724915(-) (rapC) [Bacillus subtilis subsp. subtilis strain ps4100]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPTEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSIFQFKKSNFNNLTQAYHDLALIYFLQHKQEQAMDCFRKGVRFACKFDDDLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=502452 KMZ16_RS03740 WP_080477800.1 723788..724915(-) (rapC) [Bacillus subtilis subsp. subtilis strain ps4100]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCTACTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTAATAGCAGGTAATTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGAGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATATTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGAACAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGATGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (187-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392