Detailed information NTG0502436

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KMZ16_RS01660
• Genome accession: NZ_CP076445
• Coordinates: 302530..303651 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4100
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297530..308651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ16_RS01635 (KMZ16_01630)	ycdA	297535..298599 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
KMZ16_RS01640 (KMZ16_01635)	-	298622..298753 (-)	132	WP_003246334.1	hypothetical protein	-
KMZ16_RS01645 (KMZ16_01640)	ycdB	298927..300348 (+)	1422	WP_069703670.1	YcdB/YcdC domain-containing protein	-
KMZ16_RS01650 (KMZ16_01645)	ycdC	300535..301896 (+)	1362	WP_029726976.1	YcdB/YcdC domain-containing protein	-
KMZ16_RS01655 (KMZ16_01650)	cwlK	301904..302407 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
KMZ16_RS01660 (KMZ16_01655)	rapF	302530..303651 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
KMZ16_RS01665 (KMZ16_01660)	ycdF	303758..304534 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
KMZ16_RS01670 (KMZ16_01665)	ycdG	304559..306244 (+)	1686	WP_038427325.1	alpha-glucosidase	-
KMZ16_RS01675 (KMZ16_01670)	znuA	306432..307391 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
KMZ16_RS01680 (KMZ16_01675)	znuC	307446..308141 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=502436 KMZ16_RS01660 WP_015715201.1 302530..303651(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4100]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=502436 KMZ16_RS01660 WP_015715201.1 302530..303651(+) (rapF) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405